| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3042 |
|---|
| Symbol | fabZ |
|---|
| ID | 5107522 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas mendocina ymp |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009439 |
|---|
| Strand | - |
|---|
| Start bp | 3368219 |
|---|
| End bp | 3368659 |
|---|
| Gene Length | 441 bp |
|---|
| Protein Length | 146 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 640504299 |
|---|
| Product | (3R)-hydroxymyristoyl-ACP dehydratase |
|---|
| Protein accession | YP_001188528 |
|---|
| Protein GI | 146308063 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0764] 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases |
|---|
| TIGRFAM ID | [TIGR01750] beta-hydroxyacyl-[acyl carrier protein] dehydratase FabZ |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 0.462423 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 44 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGGACA TCAACGAAAT TCGTGAATAT TTGCCGCACC GCTATCCTTT CCTGCTGGTG
GATCGTGTGG TGGACCTGGA CGTCGAAGGC AAGCAGATTC GCGCCTATAA GAATGTCAGC
ATCAACGAGC CGTTCTTCAA TGGCCATTTC CCCGAGCACC CGATCATGCC TGGCGTGCTG
ATCATCGAGG CCATGGCCCA GGCCGCCGGC ATCCTCGGTT TCAAGATGAT GGGCGTGAAG
CCGGCCGACG GCACCCTCTA TTACTTCGTC GGTTCGGACA AGCTGCGTTT CCGCTCGCCG
GTGCTGCCGG GCGATCAGCT CACGCTGGAA GCCAAGTACC TGAGCGATCG TCGCAGCATC
TGGAAATTCG AGTGCCGCGC CACTGTCGAT GGCAAGGAAG TCTGCTCCGC TGAGATCATC
TGTGCGGAAC GCAAACTATG A
|
|---|
| Protein sequence | MMDINEIREY LPHRYPFLLV DRVVDLDVEG KQIRAYKNVS INEPFFNGHF PEHPIMPGVL
IIEAMAQAAG ILGFKMMGVK PADGTLYYFV GSDKLRFRSP VLPGDQLTLE AKYLSDRRSI
WKFECRATVD GKEVCSAEII CAERKL
|
|---|
| |