| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3034 |
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| Symbol | |
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| ID | 5107514 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 3356909 |
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| End bp | 3357754 |
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| Gene Length | 846 bp |
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| Protein Length | 281 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640504291 |
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| Product | 2-dehydro-3-deoxyphosphooctonate aldolase |
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| Protein accession | YP_001188520 |
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| Protein GI | 146308055 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2877] 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase |
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| TIGRFAM ID | [TIGR01362] 3-deoxy-8-phosphooctulonate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.545781 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.00404294 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCGCAGA AGATCATCAA GGTTCGCGAT ATCGAGATCG CCAACGACAA GCCGTTCGTG
CTGTTCGGTG GCATCAACGT GCTCGAGTCG CGTGACCTGG CCATGCAGGC CTGCGAGGAA
TACGTGCGGG TGACCGAGAA GCTCGGCATC CCCTACGTGT TCAAGGCCAG CTTCGACAAG
GCCAACCGTT CCTCCATCAC CTCCTTCCGC GGCCCTGGCC TGGAAGAGGG CATGAAGATC
TTCGAAGAGG TGAAGAAGAC CTTCGGCGTA CCGGTGATCA CCGACGTCCA CGAGCCGCAT
CAGGCGGCTG CCGTGGCCGA AGTGTGCGAC ATCATCCAGC TGCCGGCCTT CCTTTCGCGG
CAGACCGACC TGGTGGTGGC CATGGCCAAG ACCGGTGCGG TGATCAACAT CAAGAAGGCG
CAATTCCTCG CCCCGCAGGA AATGAAGCAC ATCCTCACCA AGTGCGAAGA GGCCGGTAAC
GATCAGCTGA TCCTCTGCGA GCGCGGTTCC TCCTTCGGTT ACAACAACCT GGTGGTGGAC
ATGCTCGGCT TCGGCATCAT GAAGCAGTTC GAATACCCGG TGTTCTTCGA CGTGACCCAC
GCCCTGCAGA TGCCGGGTGG TCGCGCCGAC TCCGCTGGTG GCCGTCGTGC CCAGGTCACC
GACCTGGCCA AGGCCGGCAT GAGCCAGGGC CTGGCCGGTC TGTTCCTCGA AGCCCATCCG
GATCCGGAAA ACGCCAAGTG CGATGGCCCG TGCGCCTTGC GCCTGAACAA GCTGGAGCCT
TTCCTCAGCC AGCTCAAGCA GCTTGACGAT CTGGTGAAGA GTTTTCCGCC AATCGAGACT
GCCTGA
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| Protein sequence | MAQKIIKVRD IEIANDKPFV LFGGINVLES RDLAMQACEE YVRVTEKLGI PYVFKASFDK
ANRSSITSFR GPGLEEGMKI FEEVKKTFGV PVITDVHEPH QAAAVAEVCD IIQLPAFLSR
QTDLVVAMAK TGAVINIKKA QFLAPQEMKH ILTKCEEAGN DQLILCERGS SFGYNNLVVD
MLGFGIMKQF EYPVFFDVTH ALQMPGGRAD SAGGRRAQVT DLAKAGMSQG LAGLFLEAHP
DPENAKCDGP CALRLNKLEP FLSQLKQLDD LVKSFPPIET A
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