Gene Pmen_3033 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_3033 
Symboleno 
ID5107513 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp3355472 
End bp3356761 
Gene Length1290 bp 
Protein Length429 aa 
Translation table11 
GC content64% 
IMG OID640504290 
Productphosphopyruvate hydratase 
Protein accessionYP_001188519 
Protein GI146308054 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0148] Enolase 
TIGRFAM ID[TIGR01060] phosphopyruvate hydratase 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.427825 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.00539461 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCAAAGA TCGTCGACAT CAAGGGTCGT GAGGTTCTCG ACTCCCGTGG CAACCCCACC 
GTGGAAGCCG ATGTAATTCT GGAAGGTGGC ATTGTCGGCA GCGCGTGCGC TCCGTCCGGC
GCCTCCACCG GCTCGCGCGA GGCGCTGGAG CTGCGTGACG GCGACAAGAG CCGTTACCTG
GGCAAGGGCG TGCTGAAAGC CGTCGCCAAC ATCAACGGCC CGATTCGCGA CCTGCTGCTG
GGTAAGGACG CGACCGATCA GCAGGCGCTG GACCGCGCGA TGATCGAGCT CGACGGTACC
GAGAACAAGG CCAAGCTGGG CGCCAACGCC ATCCTCGCCG TGTCCCTGGC CGCTGCCAAG
GCCGCTGCTC AGGCCAAGGG CGTGCCGCTG TATGCGCACA TCGCCGACCT GAACGGCACC
CCGGGTGTCT ACTCCATGCC AGTGCCGATG ATGAACATCA TCAATGGCGG CGAGCATGCC
GATAACAACG TCGACATCCA GGAGTTCATG GTCCAGCCGG TCGGCGCCAA GAATTTCGCC
GATGCCCTGC GCATGGGCGC CGAAATCTTC CACCACCTCA AAGCCGTACT GAAGGCCCGT
GGCCTGAACA CTGCCGTGGG TGACGAAGGC GGCTTCGCGC CGAACCTGGC CTCCAACGAA
GACGCCCTGG CCGCCATCGC CGAGGCCGTG GCCAACGCCG GCTACAAGCT GGGTGACGAC
GTGACCCTGG CGCTGGACTG CGCTTCCAGC GAATTCTTCA AGGACGGCAA GTACGACCTG
GAAGGCGAGG GCAAGGTATT CGACGCCGCC GGTTTCGCCG ACTACCTGGC TGGCCTGACC
CAGCGTTACC CGATCATCTC CATCGAAGAC GGCATGGACG AGTCGGACTG GGCTGGCTGG
AAGGTGCTGA CCGACAAGAT CGGCGCCAAG GTGCAGTTGG TTGGCGACGA CCTGTTCGTG
ACCAACACCA AGATCCTCAA GCGCGGCATC GACGAGAAGA TCGGCAACTC GATCCTGATC
AAGTTCAACC AGATCGGCTC GCTGACCGAG ACCCTGGAAG CCATCCAGAT GGCCAAGGCC
GCCGGCTTTA CCGCGGTGAT CTCGCACCGC AGCGGCGAAA CCGAAGACAG CACCATCGCC
GATCTGGCCG TGGGTACTGC CGCAGGTCAG ATCAAGACCG GTTCGCTGTG CCGTTCCGAC
CGCGTTTCCA AGTACAACCA GCTGCTGCGC ATCGAAGAGC AGCTGGGCGG CAAGGCTCCG
TACAAGGGCC GTGCCGAGTT CCGCGGCTGA
 
Protein sequence
MAKIVDIKGR EVLDSRGNPT VEADVILEGG IVGSACAPSG ASTGSREALE LRDGDKSRYL 
GKGVLKAVAN INGPIRDLLL GKDATDQQAL DRAMIELDGT ENKAKLGANA ILAVSLAAAK
AAAQAKGVPL YAHIADLNGT PGVYSMPVPM MNIINGGEHA DNNVDIQEFM VQPVGAKNFA
DALRMGAEIF HHLKAVLKAR GLNTAVGDEG GFAPNLASNE DALAAIAEAV ANAGYKLGDD
VTLALDCASS EFFKDGKYDL EGEGKVFDAA GFADYLAGLT QRYPIISIED GMDESDWAGW
KVLTDKIGAK VQLVGDDLFV TNTKILKRGI DEKIGNSILI KFNQIGSLTE TLEAIQMAKA
AGFTAVISHR SGETEDSTIA DLAVGTAAGQ IKTGSLCRSD RVSKYNQLLR IEEQLGGKAP
YKGRAEFRG