| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3029 |
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| Symbol | |
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| ID | 5107509 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 3352990 |
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| End bp | 3353904 |
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| Gene Length | 915 bp |
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| Protein Length | 304 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640504286 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001188515 |
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| Protein GI | 146308050 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.000686925 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAACCGCT GGGAAGGGCT CGACGAATTC GTCGCCGTCG CAGAATGCGG CCAGTTCAGC
GCCGCTGCCG AGCGCCTGGG GCTGTCCACG TCGCAGGTCA GTCGCCAGGT GGCACGCCTG
GAAGAACGCC TGCAGAGCCG CCTGTTCTAC CGCAGCACCA GGCGGGTGGC GCTGACCGAG
GCCGGCCAGT TGTTTCTGCA ACACTGCCAG CGCCTGCAGG ATGCCCGCGA GGAAGCCCTG
CGCGCGGTTG GCGATCTCGG CGCTGAACCC AAGGGGCTGC TGCGCATGAC CTGCGCGGTG
GCGTATGGCG AGCGTTTCAT CGTGCCGCTG GTCAACGACT TCATGGCGCG GCATCCGCAG
TTGCGCGTGG AGATCGAACT GTCCAACCGC CAGCTCGACC TGCTGCACGA AGGCCTGGAC
CTGGCCATAC GCCTGGGTCG CCTGCAGGAC TCGCGCCTGA TGGCCGCGCG CCTGGCCCCG
CGAGAAATGT ACCTGTGCGC GGCCCCCGAG TATCTGCAGC GTTACGGACG TCCGCACTCG
CTCTCCGAAC TGGCCCGGCA CAACTGCCTG ATCGGCAGCA GCGATCACTG GAGCTTCGTC
GACAACGGAC GGGAGACGCA GATGCGCGTG CAGGGCAACT GGCGCTGCAA CAGCGGCCAG
GCGGTACTCG ATGCGGCGCT GCGTGGCTTC GGCCTGTGCC AGCTACCCGA TTACTACGTG
CTGGAGCATC TGGCCAGCGG CGCACTGGTG TCCCTGCTGC AACAGCACCG CCCGCCGAAT
ACGGCGGTCT GGGCGCTCTA CCCGCAGCAA CGGCATCTCT CGCCGAAAGT GCGCCAACTG
GTCGACCACC TCAAGGCGGG CTTGAGCGAG CGCATCGAGT ACCGCCCGCA ACAGAATGTC
ACAGCCAACG GTTGA
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| Protein sequence | MNRWEGLDEF VAVAECGQFS AAAERLGLST SQVSRQVARL EERLQSRLFY RSTRRVALTE
AGQLFLQHCQ RLQDAREEAL RAVGDLGAEP KGLLRMTCAV AYGERFIVPL VNDFMARHPQ
LRVEIELSNR QLDLLHEGLD LAIRLGRLQD SRLMAARLAP REMYLCAAPE YLQRYGRPHS
LSELARHNCL IGSSDHWSFV DNGRETQMRV QGNWRCNSGQ AVLDAALRGF GLCQLPDYYV
LEHLASGALV SLLQQHRPPN TAVWALYPQQ RHLSPKVRQL VDHLKAGLSE RIEYRPQQNV
TANG
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