| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3028 |
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| Symbol | |
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| ID | 5107508 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 3351699 |
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| End bp | 3352811 |
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| Gene Length | 1113 bp |
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| Protein Length | 370 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640504285 |
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| Product | alcohol dehydrogenase |
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| Protein accession | YP_001188514 |
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| Protein GI | 146308049 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1062] Zn-dependent alcohol dehydrogenases, class III |
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| TIGRFAM ID | [TIGR02818] S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.000388356 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATCAAGT CCCGCGCCGC CGTCGCCTTC GCCCCGAACG AGCCCCTGAA AATCGTCGAA
GTGGATGTGG CGCCGCCCAA GGCCGGTGAA GTGCTGGTGC GCATCGTCGC GACCGGCGTC
TGCCACACCG ACGCCTACAC CCTGTCCGGC CAGGACAGCG AGGGCGTGTT CCCCTGCATT
CTCGGTCACG AAGGGGGCGG TATCGTCGAG GCGGTGGGCG AGGGCGTCAC CTCGCTGGCG
GTCGGCGATC ACGTGATTCC GCTGTACACC GCCGAATGCG GCGAGTGCAA ATTCTGCAAA
TCCAACAAGA CCAACCTGTG CAGCTCCGTG CGTGCCACCC AGGGCAAGGG CCTGATGCCC
GACGGCACCA GTCGCTTCTC CTACAACGGC GAGCCGATCT ACCACTACAT GGGCTGCTCG
ACCTTCTCCG AGTACACCGT GCTGCCGGAA GTCTCCCTGG CCAAGATTCC CAAGGAGGCG
CCGCTGGAGA AGGTTTGTCT GCTCGGCTGC GGCGTGACCA CCGGCATTGG CGCCGTGCTC
AATACCGCCA AGGTCACCGA AGGCTCCACC GTGGCCATCT TCGGTCTGGG CGGCATCGGC
CTGGCGGCCA TCATCGGCGC CAAGATGGCC AAGGCTTCGC GCATCATCGG CATCGACATC
AACCCGGCCA AGGAAGCCGT GGCGCGTGAG CTGGGGCTGA CCGACTTCGT CAACCCGAAG
GAGCACAGCA AGCCGATCCA GGAGGTCATC GTCGAGATGA CCGACGGTGG CGTCGACTAC
AGCTTCGAGT GCATCGGCAA CGTGCAGCTG ATGCGTGCAG CGCTGGAGTG CTGCCACAAG
GGCTGGGGCG AGTCGACCAT CATCGGCGTG GCGCCGGCCG GTGCCGAGAT CAGCACCCGC
CCGTTCCAGC TGGTCACCGG TCGCGTCTGG CGCGGCAGCG CCTTCGGTGG CGTGAAGGGC
CGTACCGAAC TGCCGGGTTA TGTGCAAAAG GCGCAGAGCG GCGAGATTCC GCTGGACACC
TTCATCACCC ACAACCTGCC GCTGGATCAG ATCAACGAAG CGTTCGAGCT GATGCACGAA
GGCAAGAGCA TTCGTACCGT CATTCATTTC TGA
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| Protein sequence | MIKSRAAVAF APNEPLKIVE VDVAPPKAGE VLVRIVATGV CHTDAYTLSG QDSEGVFPCI
LGHEGGGIVE AVGEGVTSLA VGDHVIPLYT AECGECKFCK SNKTNLCSSV RATQGKGLMP
DGTSRFSYNG EPIYHYMGCS TFSEYTVLPE VSLAKIPKEA PLEKVCLLGC GVTTGIGAVL
NTAKVTEGST VAIFGLGGIG LAAIIGAKMA KASRIIGIDI NPAKEAVARE LGLTDFVNPK
EHSKPIQEVI VEMTDGGVDY SFECIGNVQL MRAALECCHK GWGESTIIGV APAGAEISTR
PFQLVTGRVW RGSAFGGVKG RTELPGYVQK AQSGEIPLDT FITHNLPLDQ INEAFELMHE
GKSIRTVIHF
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