| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3021 |
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| Symbol | |
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| ID | 5107501 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 3345783 |
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| End bp | 3346664 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640504278 |
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| Product | peptidase M23B |
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| Protein accession | YP_001188507 |
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| Protein GI | 146308042 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0739] Membrane proteins related to metalloendopeptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.00000191073 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGAGTTGCA CTGCCGTTCA CGTGCTAGTT CGCAGAGCTG CAGGCTTTCG CCTGTGGCTC
GCCTTGCTTG CCGCCAGCGC ATTGGCCGGT TGCGCCAGTC CGCCGCCGGG TGGCGTACAG
GTGGTCGACC GCGGGCATAA TCAGGGCAGC GCTCCGGTGG TGCAGCGTCA GCCGGTACGC
AGCGGTCATT ACGTGGTGCA GCGTGGCGAT ACGCTCTATT CCATTGCCTT TCGTTTCGGT
TGGGACTGGA AGGCGTTGGC CGCGCACAAT GGCCTGCGTG ACCCCTACCT GATTCGTGTC
GGCCAGGTCA TCCGCTTCGA CAATCGCCCG ACCCCGGCTC AGCCGATAGC CTCGGCACCC
TCGGCTGGCA GTGCTCCGGT AGCGACGCAG CCGGCGCCCA GCCGCCCACC GGTAGCCACC
ACGCCGAGTA CGCAACCCAC GCCAGCGCCG ACCAGACCGC CTGTGGCCAG CGCGCCTGCC
ACCACGCCGG TCACGCCGGT GAGCCGCTCT GCCAGTGGCT GGGCCTGGCC AACGCAGGGC
ACGGTCATCA GCCGTTTCTC CTCAAACGGT AGTTTGAATA AAGGCATTGA TATCGCGGGG
GAATTAGGAC AGCCTGTTTT AGCTGCGTCT GATGGTTCAG TGGTGTACGC CGGGAGTGGT
TTGCGGGGCT ACGGCGAGTT GATCATCATC AAGCACAGCG ATACCTACGT AAGTGCCTAC
GGTCATAACC GCAGGCTATT GGTACGGGAG GGGCAGCAGG TCAAAGCCGG GCAGAGCATT
GCCGAGATGG GGTCTACAGG GGCCGACCGG GTGAAACTGC ACTTCGAGAT TCGCCGCCAA
GGTAAACCTG TCGATCCGCT GCAGTATCTG CCACGTCGTT GA
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| Protein sequence | MSCTAVHVLV RRAAGFRLWL ALLAASALAG CASPPPGGVQ VVDRGHNQGS APVVQRQPVR
SGHYVVQRGD TLYSIAFRFG WDWKALAAHN GLRDPYLIRV GQVIRFDNRP TPAQPIASAP
SAGSAPVATQ PAPSRPPVAT TPSTQPTPAP TRPPVASAPA TTPVTPVSRS ASGWAWPTQG
TVISRFSSNG SLNKGIDIAG ELGQPVLAAS DGSVVYAGSG LRGYGELIII KHSDTYVSAY
GHNRRLLVRE GQQVKAGQSI AEMGSTGADR VKLHFEIRRQ GKPVDPLQYL PRR
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