| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3016 |
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| Symbol | |
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| ID | 5107497 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 3339155 |
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| End bp | 3339655 |
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| Gene Length | 501 bp |
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| Protein Length | 166 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640504274 |
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| Product | CinA domain-containing protein |
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| Protein accession | YP_001188503 |
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| Protein GI | 146308038 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1546] Uncharacterized protein (competence- and mitomycin-induced) |
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| TIGRFAM ID | [TIGR00199] competence/damage-inducible protein CinA C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.633216 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.000000000145641 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGATTCAA TCAGCCAACT GGCCGCGCAA CTGGGCCGGC AACTGCAAGA CGCTGGCGCC
CAGGTGACCA CTGCCGAGTC CTGCACCGGG GGTGGCATCG CCGAGGCCAT CACGCGTATC
CCCGGCAGCT CGGCCTGGTT CGAGGCCGGC TACGTCACCT ACTCCAACGC GCAGAAGAGC
AAGCAGCTGG GTGTGTCGGC CGAGCTGTTC GCCACCGTTG GGGCGGTCAG CCGCGAGGTG
GTCGAGGCCA TGGTGCGCGG CGCTCAGGCC CATAGCGGTG CGCGCTATGC GGTGGCGGTC
AGTGGTGTGG CGGGGCCCGA CGGCGGTTCG CCGGAGAAGC CGGTAGGCAC CGTATGGCTG
GCCTGGGGCG ATGGCGAGCG GCTGTACAGC GTGCGCAAAC AGTTCGCAGG GGATCGCCAG
GAAGTTCGCC GACAAACGGT CGAGACCGCT CTGGCGGGGC TTTCGCGCCT GCTTGCAGAG
GAAAATCCGT CTGCGGGGTA G
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| Protein sequence | MDSISQLAAQ LGRQLQDAGA QVTTAESCTG GGIAEAITRI PGSSAWFEAG YVTYSNAQKS
KQLGVSAELF ATVGAVSREV VEAMVRGAQA HSGARYAVAV SGVAGPDGGS PEKPVGTVWL
AWGDGERLYS VRKQFAGDRQ EVRRQTVETA LAGLSRLLAE ENPSAG
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