Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_3007 |
Symbol | |
ID | 5107488 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | - |
Start bp | 3330197 |
End bp | 3330538 |
Gene Length | 342 bp |
Protein Length | 113 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640504265 |
Product | hypothetical protein |
Protein accession | YP_001188494 |
Protein GI | 146308029 |
COG category | [S] Function unknown |
COG ID | [COG3171] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 43 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.000000000697819 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCGACCA ACCGTTCCCG CCGTCTGCGC AAGAAGCTCT GTGTCGATGA ATTCCAGGAG CTGGGCTTCG AGCTGACCCT GAACTTCAAG GCCGACCTGA ACGACCAGAC CATCGACACC TTCGTCGAGC AGTTCCTCGG TCAGGCCATC GCTGCCAACG GCCTCGACTA CGTCGGTGGT GAGGACTATG GCCTGGTCTG CCTGGCCAAG CGTGGCTCGG TCAACGAAGA GCAGCGCACT GCCGTGGAGG CCTGGCTGAA GGGCCGCGAC GAGCTGCAGA ACTTCGAAAT CAGCCCGTTG CTGGACGTCT GGTACCCGGA AAATCCGATC AACCAGGCCT GA
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Protein sequence | MATNRSRRLR KKLCVDEFQE LGFELTLNFK ADLNDQTIDT FVEQFLGQAI AANGLDYVGG EDYGLVCLAK RGSVNEEQRT AVEAWLKGRD ELQNFEISPL LDVWYPENPI NQA
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