Gene Pmen_3007 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_3007 
Symbol 
ID5107488 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp3330197 
End bp3330538 
Gene Length342 bp 
Protein Length113 aa 
Translation table11 
GC content61% 
IMG OID640504265 
Producthypothetical protein 
Protein accessionYP_001188494 
Protein GI146308029 
COG category[S] Function unknown 
COG ID[COG3171] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000000697819 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCGACCA ACCGTTCCCG CCGTCTGCGC AAGAAGCTCT GTGTCGATGA ATTCCAGGAG 
CTGGGCTTCG AGCTGACCCT GAACTTCAAG GCCGACCTGA ACGACCAGAC CATCGACACC
TTCGTCGAGC AGTTCCTCGG TCAGGCCATC GCTGCCAACG GCCTCGACTA CGTCGGTGGT
GAGGACTATG GCCTGGTCTG CCTGGCCAAG CGTGGCTCGG TCAACGAAGA GCAGCGCACT
GCCGTGGAGG CCTGGCTGAA GGGCCGCGAC GAGCTGCAGA ACTTCGAAAT CAGCCCGTTG
CTGGACGTCT GGTACCCGGA AAATCCGATC AACCAGGCCT GA
 
Protein sequence
MATNRSRRLR KKLCVDEFQE LGFELTLNFK ADLNDQTIDT FVEQFLGQAI AANGLDYVGG 
EDYGLVCLAK RGSVNEEQRT AVEAWLKGRD ELQNFEISPL LDVWYPENPI NQA