| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3004 |
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| Symbol | |
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| ID | 5107485 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 3324603 |
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| End bp | 3325934 |
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| Gene Length | 1332 bp |
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| Protein Length | 443 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640504262 |
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| Product | deoxyguanosinetriphosphate triphosphohydrolase-like protein |
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| Protein accession | YP_001188491 |
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| Protein GI | 146308026 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0232] dGTP triphosphohydrolase |
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| TIGRFAM ID | [TIGR01353] deoxyguanosinetriphosphate triphosphohydrolase, putative |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.664868 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.00000271767 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | TTGGATTGGC ACACCCTGCT CACCCGTGAA CGTCTAGGCA AACCCGCTCC CAGCTCGGCA
GAGCTCGGAC GCAGCCCTTT CCACAAGGAT CATGACCGCA TCATCTTCTC CGGTGCGTTC
CGCCGCCTGG GTCGCAAGAC CCAGGTGCAC CCGGTCACCA GCAACGACCA TATCCACACC
CGCCTGACCC ACTCGCTGGA GGTCAGCTGC GTCGGCCGTT CCCTGGCCAT GCGCGTCGGC
GAGATGCTGC GTGACGAGCT GCCCGACTGG TGCGCGCCGA GCGACCTGGG CATGGTCGTG
CAGTCCGCCT GCCTGGCCCA CGATATCGGC AACCCGCCGT TCGGCCATTC CGGCGAAGAC
GCCATTCGCC ACTGGTTCCA GCAGGCCGCC GGACGTGGCT GGCTGGATGC GATGAGTGAT
GCCGAACGCG CCGACTTTCT CAATTTCGAA GGCAACGCCC AGGGTTTTCG CGTGCTCACC
CAGCTGGAGT ACCACCAGTT CGACGGCGGC ACCCGGCTGA CCTACGCGAC CCTAGGCACC
TACCTCAAGT ACCCCTGGAC GGCCCGCCAT GCCGACGCCC AGGGCTACAA GAAACACAAG
TTCGGCTGCT ACCAGAGCGA ACTGCCGCTG CTCGAGCAGA TCGCCGCCAA GCTCGAGCTG
CCGCAGCTGG AGGCTCAGCG CTGGGGGCGC CACCCGCTGG TCTATCTGAT GGAGGCGGCG
GACGACATCT GCTACGGCCT GATCGATCTG GAAGACGGCG TGGAGATGGA GCTGCTCGAC
TACACCGAGG TCGAGGCTCT GCTGCTGGAC CTGGTCGGCG ACGATGTGCC GGAAACCTAT
CGCCAGCTCG GCCCCAAAGA CTCGCGTCGC CGCAAGCTGG CGATCCTGCG CGGCAAGGCC
ATCGAGCACC TGACCAATGC CGCAGCCAGT GCTTTCGTCG AGCAGCAGCG CGACCTGCTC
GCCGGCCAGC TGCAGGGCGA TCTGGTCGAA CACATGCACG GCGCCGCCAA GCGCTGCGTG
CAGAGCGCGA AGTCGCTGGC GCGGGAGAAG ATCTTTCACG ACAAGCGCAA GACGCTGCAT
GAAATCGGCG CCTACACCAC GCTGGAAATC CTCCTCAACG CCTTCTGCGG CGCTGCACTG
GAGCAGCACA GCGGTCGCAC GCTATCGTTC AAGCACCGGC GCATTCTCGA TCTGCTCAGC
TACTACGCCC CGGAACCGGG CTGGCCGCTG TATCGCTCGT TCATGCGGGT GATCGACTTC
ATCGCCGGCA TGACCGACAG CTACGCTACG GAAATGGCGA GGGAAATGAC GGGCCGCTCG
AGCCCCGTCT GA
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| Protein sequence | MDWHTLLTRE RLGKPAPSSA ELGRSPFHKD HDRIIFSGAF RRLGRKTQVH PVTSNDHIHT
RLTHSLEVSC VGRSLAMRVG EMLRDELPDW CAPSDLGMVV QSACLAHDIG NPPFGHSGED
AIRHWFQQAA GRGWLDAMSD AERADFLNFE GNAQGFRVLT QLEYHQFDGG TRLTYATLGT
YLKYPWTARH ADAQGYKKHK FGCYQSELPL LEQIAAKLEL PQLEAQRWGR HPLVYLMEAA
DDICYGLIDL EDGVEMELLD YTEVEALLLD LVGDDVPETY RQLGPKDSRR RKLAILRGKA
IEHLTNAAAS AFVEQQRDLL AGQLQGDLVE HMHGAAKRCV QSAKSLAREK IFHDKRKTLH
EIGAYTTLEI LLNAFCGAAL EQHSGRTLSF KHRRILDLLS YYAPEPGWPL YRSFMRVIDF
IAGMTDSYAT EMAREMTGRS SPV
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