Gene Pmen_2990 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_2990 
Symbol 
ID5107471 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp3313299 
End bp3313895 
Gene Length597 bp 
Protein Length198 aa 
Translation table11 
GC content71% 
IMG OID640504248 
Productflavodoxin/nitric oxide synthase 
Protein accessionYP_001188477 
Protein GI146308012 
COG category[R] General function prediction only 
COG ID[COG0655] Multimeric flavodoxin WrbA 
TIGRFAM ID[TIGR01755] NAD(P)H:quinone oxidoreductase, type IV 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.991698 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.0079617 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGCGCGC CCTATATCCT GGTGCTCTAC TACAGCCGCC ACGGCGCCAC CGCACAGATG 
GCCCGCCAGA TTGCCCGCGG CGTCGAGATG GCTGGCCTGG AAGCCCGCTT GCGCACCGTG
CCGGCAGTCT CCAGCGAATG CGAGGCGGTG GCGCCCAGCG TTCCCGACGA AGGCGCCGTC
TACGCGACAC TGGACGACCT GAAGAACTGC TCGGGCCTGG CCCTGGGCAG CCCGACCCGC
TTCGGCAACA TGGCGGCGCC GCTGAAGTAC TTCCTCGACG GCACCAGCAA CCTGTGGCTG
ACGGGCGAGC TGGTGGGCAA GCCCGCCGGC GTGTTCACCT CCACCGCCAG CCTGCACGGC
GGCCAGGAGA GCACGCTGCT GTCGATGATG CTGCCGTTGC TGCACCACGG CATGCTGATC
TGCGGCCTGC CCTACAGCGA GTCGGCTCTG CTCGAAACCC GCGGTGGCGG CACGCCCTAC
GGCCCCAGCC ATCATGCGGG CGGCGACGGC AAGCGCGCCC TGGACGAACA CGAGACGGCC
CTGTGCCGCG CCCTCGGCCA GCGCCTGGCG CAGCTCGCCG GCAAGCTGGA GCGCTGA
 
Protein sequence
MSAPYILVLY YSRHGATAQM ARQIARGVEM AGLEARLRTV PAVSSECEAV APSVPDEGAV 
YATLDDLKNC SGLALGSPTR FGNMAAPLKY FLDGTSNLWL TGELVGKPAG VFTSTASLHG
GQESTLLSMM LPLLHHGMLI CGLPYSESAL LETRGGGTPY GPSHHAGGDG KRALDEHETA
LCRALGQRLA QLAGKLER