Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_2979 |
Symbol | |
ID | 5107697 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 3304514 |
End bp | 3304681 |
Gene Length | 168 bp |
Protein Length | 55 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640504237 |
Product | periplasmic nitrate reductase NapE |
Protein accession | YP_001188466 |
Protein GI | 146308001 |
COG category | [C] Energy production and conversion |
COG ID | [COG4459] Periplasmic nitrate reductase system, NapE component |
TIGRFAM ID | [TIGR02973] periplasmic nitrate reductase, NapE protein |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 0.0578173 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATAGCA CGCCCGAGGG CAGAGCCACG AAAGGCAAGG AAACCCGCCT GTTCGTCTTT CTCGTCGTCT GCCTCTTCCC CCTCCTTTCG GTCGCCCTGG TCGGCGGCTA CGGATTCATC ATCTGGTTCA TGCAGATGCT GCTGGGGCCG CCCGGCCCAC CCACCTGA
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Protein sequence | MDSTPEGRAT KGKETRLFVF LVVCLFPLLS VALVGGYGFI IWFMQMLLGP PGPPT
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