| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2976 |
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| Symbol | |
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| ID | 5107694 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 3301660 |
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| End bp | 3302337 |
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| Gene Length | 678 bp |
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| Protein Length | 225 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640504234 |
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| Product | two component transcriptional regulator |
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| Protein accession | YP_001188463 |
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| Protein GI | 146307998 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 43 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.176642 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATTGT TGGTGGTGGA GGATGAGGCG CTGCTGCGTC ACCATCTGTT CACTCGCCTC
AGTGAAAACG GGCATGTGGT GGATGCCGTG CGCACCGCTG AAGAGGCGCT GTATCGAGCT
GAGTCCTTCA ATCACGACCT GGCTCTGGTC GACCTGGGTC TGCCGGGCAT GAGCGGCATC
GACCTGATCC GCCAGCTGCG CAGCCAGGAC AAGAACTTTC CGATCCTCAT CCTCACCGCC
CGCGGCAATT GGCAGGACAA GGTCGAGGGC CTGTCCTGCG GTGCCGACGA CTATCTGGTG
AAACCCTTTC AGTTCGAGGA ACTGGAGGCA CGCCTGAACG CCTTGCTGCG CCGTTCCTCG
GGCTTTACCA AATCCACCAT CGAGGCCGGC TCCCTGGTGC TCGATCTCAA TCGCAAGCAG
GCGACCGTCG ACGAGCAGTC GCTGCAGCTC ACTGCCTACG AGTACCGCAT CCTCGAGTAC
CTCATGCTCC ATCACCAGCA GGTGGTGCCG AAGGAACGCC TGATGGAGCA GCTGTACCCC
GGCGATGACG AACGTGATCC CAACGTCATC GAAGTGCTGG TCGGGCGTCT GCGTCGCAAG
CTGGAGGCGA TGCTGGGCGG CAAGCTGATC GAAACCGTGC GTGGCCAGGG CTACATGTTC
AACGAGCGCT GCAAGTGA
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| Protein sequence | MKLLVVEDEA LLRHHLFTRL SENGHVVDAV RTAEEALYRA ESFNHDLALV DLGLPGMSGI
DLIRQLRSQD KNFPILILTA RGNWQDKVEG LSCGADDYLV KPFQFEELEA RLNALLRRSS
GFTKSTIEAG SLVLDLNRKQ ATVDEQSLQL TAYEYRILEY LMLHHQQVVP KERLMEQLYP
GDDERDPNVI EVLVGRLRRK LEAMLGGKLI ETVRGQGYMF NERCK
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