| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2972 |
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| Symbol | |
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| ID | 5107690 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 3297005 |
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| End bp | 3298099 |
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| Gene Length | 1095 bp |
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| Protein Length | 364 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640504230 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_001188459 |
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| Protein GI | 146307994 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.183535 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCTCAG CCTGGATTGA CCCAATCGCT CGGTCGGCTT GCCCTGCGCT GCGGCCGCTG
CCTACCATCG GCGACCCCGA CCTTGGAAGT CCATGCATGC GCGAACGCAC CATCGCCAGC
CACTTCGTCC GCGCCGCACT GCGCGGCGCC CAGCGTCAGG GCCTGGCCTG CGAACCCATA
TTGCGCCAGG CGGGCATCCA GCCAGCGGTG CTCATCGAGC CGCGTGCGCG CATCGCCCCC
GAGCAGTTCG CCCGCCTGGT GCAGCTGCTA TGGGAAGCAC TGGACGACGA ATACCTGGGT
TTCGGTCGCC AGCCGAGCAA ACGCGGCACC TTCGCCATGA TGGGCCACGC CATCATCCAC
TGCCGCAGCC TGGAGAAGGC GCTGAGCCGC GGCGCGCTGT TCTACGGCCT GTTCCCCGAT
GCACCGAGCA TCCGCCTGCA ACGCGAAGGC GACTGGGCGC GACTGAGCGT GGATGACAGC
ACGCTATGGG ACCCGGACCA CTTTCTGGTG GAAAGCCTGC TGGTGATCTG GCACCGCCTC
GGCAGCTGGC TGATCGGCCA GCGCATCCGC CTGGAAGAAG CCACCTTCGC CTACCCCGAA
CCGCAGCACA GCGCCGAGTA CGAACTGCTG TTCCCCTGCA CGCGGCGCTT CGGCGCCGGC
GCCACCAGCC TGCTGTTCCA CGCGCGCTAC CTGGCCATGC CGCTGCTGCA GGACGAGCGC
ACGCTCAAGC AGTTCCTCGA GCACTCCCCC GCCGACCTGC TGGCCCGTCC CGATGGTGGC
GACAGCCTGA TCAGTCAGAT CCGCCGCCTG CTCGGCCGAG ACTGCCGCAC CTGGCCCGAT
CTGGAACAGG TCGCCCAGCA GCTGCACACC AGCCCGCAGA CCCTGCGCCG CCACCTGCGC
GAAGAAGGCA CCAGCTTCCA GGAACTCAAG GACCACCTGC GCCGCGATCT CGCTATCTAC
CACCTGGGCC GCGACGAACT GGCGATTCAC GACATCGCCG AGCAGCTCGG TTTCTCCGAG
CCCTCGGCCT TTCACCGCGC GTTCAAGAAA TGGACCGGGC TGACGCCTGG GGCGTATCGG
GCACAGGAGG GTTAA
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| Protein sequence | MRSAWIDPIA RSACPALRPL PTIGDPDLGS PCMRERTIAS HFVRAALRGA QRQGLACEPI
LRQAGIQPAV LIEPRARIAP EQFARLVQLL WEALDDEYLG FGRQPSKRGT FAMMGHAIIH
CRSLEKALSR GALFYGLFPD APSIRLQREG DWARLSVDDS TLWDPDHFLV ESLLVIWHRL
GSWLIGQRIR LEEATFAYPE PQHSAEYELL FPCTRRFGAG ATSLLFHARY LAMPLLQDER
TLKQFLEHSP ADLLARPDGG DSLISQIRRL LGRDCRTWPD LEQVAQQLHT SPQTLRRHLR
EEGTSFQELK DHLRRDLAIY HLGRDELAIH DIAEQLGFSE PSAFHRAFKK WTGLTPGAYR
AQEG
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