| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2969 |
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| Symbol | |
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| ID | 5107687 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 3292728 |
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| End bp | 3293909 |
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| Gene Length | 1182 bp |
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| Protein Length | 393 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640504227 |
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| Product | L-carnitine dehydratase/bile acid-inducible protein F |
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| Protein accession | YP_001188456 |
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| Protein GI | 146307991 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.0453018 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.0946955 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGGCC CACTGTCTTC GCTGAAAGTA CTCGATTTTT CCACCCTGCT GCCCGGGCCG
TTCGCCTCGC TGCTGCTGGC CGACATGGGC GCCGAGGTGC TGCGTGTGGA ATCGCCCACG
CGCATGGACC TGGTACGCGT GCTGCCACCG CACGACGGCG GCACCTCCAC CAGCCACGCC
TATCTCAATC GCAACAAGCG CAGCATCGCC CTGGATCTCA AGCGCCCCGA GGCGGTGGAG
GTGGTGAAGA AACTGGTGGC CGAGTACGAC ATCGTGCTGG AGCAGTTCCG CCCAAGGGTG
ATGGACAAGC TGGGCGTCGG CTACGAGGCG CTCAAGGCGA TCAATCCGCG GCTGATCTAC
GTGTCGATCA CCGGCTACGG CCAGACCGGG CCGTACCGGG ATCGCGCCGG GCATGACATC
AACTATCTGG CACTGGCTGG CATCGCCAGC TACACCGGCC GTCGCGACAG CGGCCCGCTG
CCGCTGGGCG TGCAGCTGGC GGATATCGCC GGCGGTTCCC TGCATGGAGT GATCGGCCTG
CTCGCCGCGG TGGTGCAGCG CCAGGTCACT GGCCAGGGCC AGCAGGTGGA CGTGAGCATG
ACCGACTGCG CCTTCAGCCT GCACGGCATG GCCGGCGCCG GCTATCTCGG TGCCGGCGTG
GAGCCGGAGA TGGAGAATCA GGCGCTCAAT GGCGGCAGCT TCTACGACTA TTACCGCACC
CGTGACGGTC GCTGGTTCTC GGTGGGCAGC CTGGAGCCGC AGTTCATGCA GCAGTTCTGC
CAGGCGCTGG GGCGGCCCGA ACTGGCAGCG CGCGGCCTGT CGCCGAAGCC GGAAGATCAG
CGAGCGCTCA AGCGCGAGAT CGAAATCGAG TTCGAAAAGC GCGATTTCGC CGACTGGCGC
GAGCGTTTCG CTGCCTTGGA CGCCTGCGTC GAGCCCATGC TGCCGCTGTC CGAGGCGCTC
GAACACCCAC AGATCAAGGC GCGTGCTCTG GTCGCCGAGG TGCCGCGCGA GGGGTTGCCG
GCGCAGCCGC AACTGGCCTG CCCGCTGAAG TTCTCGCACG GGCTGCCGGC ACCCCGGCAT
GTCGGGGCGG CGTTGGGCGC TCATACCGCG CAGGTGCTGG CCGAGCTGGG CTATGACGCC
GAGCAGATCG CGATATTGCG CGCGGCCGGA GCGCTTGGCT GA
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| Protein sequence | MTGPLSSLKV LDFSTLLPGP FASLLLADMG AEVLRVESPT RMDLVRVLPP HDGGTSTSHA
YLNRNKRSIA LDLKRPEAVE VVKKLVAEYD IVLEQFRPRV MDKLGVGYEA LKAINPRLIY
VSITGYGQTG PYRDRAGHDI NYLALAGIAS YTGRRDSGPL PLGVQLADIA GGSLHGVIGL
LAAVVQRQVT GQGQQVDVSM TDCAFSLHGM AGAGYLGAGV EPEMENQALN GGSFYDYYRT
RDGRWFSVGS LEPQFMQQFC QALGRPELAA RGLSPKPEDQ RALKREIEIE FEKRDFADWR
ERFAALDACV EPMLPLSEAL EHPQIKARAL VAEVPREGLP AQPQLACPLK FSHGLPAPRH
VGAALGAHTA QVLAELGYDA EQIAILRAAG ALG
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