| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2961 |
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| Symbol | |
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| ID | 5107679 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 3286673 |
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| End bp | 3287737 |
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| Gene Length | 1065 bp |
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| Protein Length | 354 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640504219 |
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| Product | phospho-2-dehydro-3-deoxyheptonate aldolase |
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| Protein accession | YP_001188448 |
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| Protein GI | 146307983 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0722] 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase |
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| TIGRFAM ID | [TIGR00034] phospho-2-dehydro-3-deoxyheptonate aldolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.967555 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.0599843 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGCAT CCGTCTCCGC TCAACTCGCT TGCCCCGTTA CCACCATCGC CCGCCGTAGC
GCCCAGCCGC TGCCCAGCCC CGCCGTACTG CGCCAGCGCC TGCCATTGCC CGGCGCACTT
GCCGAACGCA TCGCCGCTGA CCGCGAGGCT ATCCGCGCCG TGCTCGATGG CCGCGATTCG
CGCCTGCTGG TAGTCGTCGG CCCCTGTTCC CTGCATGACC GCACCAGCGC CCTCGAATAC
GCCGAACGCC TGGCCGAACT GGCGCCGCAA GTCGATGACC AACTGCTGCT GGTGATGCGC
GCCTACGTGG AAAAGCCGCG CACCACCGTG GGCTGGAAGG GCCTGTTGTA CGACCCGCAT
CTAAATGGCA GTGGTGATAT GGCCGAAGGG CTGCGTCTGT CGCGGCAACT GATGCTGGAT
ATCCTTGAGC GTGGCCTGCC GCTGGCCAGC GAGCTGCTGC AACCCATGGC TGCCGGCTAC
TTCGATGATC TGCTCGGTTG GGCGGCGATT GGTGCACGTA CCAGCGAGTC GCAGGTGCAC
CGCGAGATGG TCAGCGGTCT GGATCTGCCG GTCGGCTTCA AGAACGGCAC CGACGGCAGC
GTCGGCATCG CCTGTGACGC CATGCGTTCG GCTGCGCACC CGCACCAGCA TTTCGGCATC
GACGACCTCG GCCATCCGGC GCTGCTGCAA ACCGTCGGCA ACCCGGATAC CCACCTGGTA
CTGCGCGGCG GTCATGGCGC GCCGAACCAC GATGCCGCCA GCGTCGCGGC CGCGCGCGAG
GCGTTGCAGC GTCAGGGCAT CGCACCGCGG ATCATGGTCG ACTGCAGCCA CGCCAACAGC
GGCAAGGACC CGCTGCGCCA GCCAGCGGTG CTGGAGAGCG TGATCGAGCA GCGCCTGGCC
GGCGACGCCA GCCTGCGCGG GGTGATGCTG GAGAGCCACC TGTTCGACGG GTGCCAGGCA
CTCTCCGGCG AATTGCGCTA TGGCGTGTCG ATCACCGATG GTTGCCTGGG CTGGAGTGGC
ACCGAAGCAG CATTGCGTCA GGCCGCCGAG CGTTTGCGCG GGTAG
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| Protein sequence | MNASVSAQLA CPVTTIARRS AQPLPSPAVL RQRLPLPGAL AERIAADREA IRAVLDGRDS
RLLVVVGPCS LHDRTSALEY AERLAELAPQ VDDQLLLVMR AYVEKPRTTV GWKGLLYDPH
LNGSGDMAEG LRLSRQLMLD ILERGLPLAS ELLQPMAAGY FDDLLGWAAI GARTSESQVH
REMVSGLDLP VGFKNGTDGS VGIACDAMRS AAHPHQHFGI DDLGHPALLQ TVGNPDTHLV
LRGGHGAPNH DAASVAAARE ALQRQGIAPR IMVDCSHANS GKDPLRQPAV LESVIEQRLA
GDASLRGVML ESHLFDGCQA LSGELRYGVS ITDGCLGWSG TEAALRQAAE RLRG
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