| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2958 |
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| Symbol | |
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| ID | 5107676 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 3282837 |
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| End bp | 3285581 |
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| Gene Length | 2745 bp |
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| Protein Length | 914 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640504216 |
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| Product | integral membrane sensor hybrid histidine kinase |
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| Protein accession | YP_001188445 |
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| Protein GI | 146307980 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG0784] FOG: CheY-like receiver |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0730745 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.010886 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTCGTC TATGTCTGGC TTTGCTGCTG TTCTGGCTTG CCTCGCCAAG CTGGGCGCTG
ATGCCTGCGC CGCTCGATAG CGACGATCTG CGCCTCGCGC TGGGCCCCTA TACCGGCTAT
TACGAAGACC GCGACGGCAG CCTGAGCGTC GAGCAGGTAC AGGCGCTGGA CGACGAAGCC
TTCGTGCGCC TGGAGGGCGA ACACGCCAAC CTGGGCAAGA ACGCCGCGGT CTGGTGGTTC
AAGGTACGCA TGGTCAACGG CTTGCAGCAC GAACTGGGCG GCTACCTGGA AATCAACTAC
CCGCTGCTCG ACCATCTGCA GGTATATCTC GTCACTCCCG ATGGCAGCCG CCTGGAGCAG
GAAAGCGGCG ACCGCTATGC CTTCTCCCAG CGCCCGGTGC AGGTGCGCAA TTTCTGGTTC
CCGCTGCAAC TGCAGCCGGG CGTCAGCACC CTGCTGGTAC GGGTGGAGAC CACCAGCACG
GTATTCGTGC CGCTGTTCTT CAGTACCTAC GGCGCCAGTG CCGCCGCCCA GGAAAACCTC
ATGGGCTTCA ACGGCGCGTT CTATGGCGTG CTGTTCGCCA TGTTCTGCTA CAACCTGTTC
CTCTACCTGT CGCTGCGCGA AGCCGCCTAT TTCTGGTACC TGACCTACAA CCTCAACGTC
GGTCTGCTGG CCGCCTGCTT CGACGGCATG CTGTTCAAGC TGCTGCCCGA GCATGTGGCC
TTCCAGTCGG TGAGCATCTA CATCCTGATG TACCTGCACT GCCTCACCGC CATCCAGTTC
AGCCGCCACT TCCTGCACGC ACGCCAGTAC TTTCCGCGCC TGGACACCGG CCTGCGCCTG
CTGATGCTGG CCTGCGCCGG CATTCTCGTT TCGGTACCGC TGATCGGCCT GACCGTCTGG
AACATCCTGG CCAGCGTCAC CGTCTCCCTG GTTTCCCTGG CCCTGCTGCT CACCGGTCTC
TACGTCTGGC GCCGTGGCGT GCGCTACGGC TCCTACTACA CCCTGGCCTG GGCGATCATG
CTGTTCGCCT TCATCCAGGC CACCACCGGC TCGCTGGGCC TGGAGGTCTT CGGCGTGTTC
GGCGCCACGG CGGTGAAGAT CGGCGTGACC ATCGAGCTGA TCACCCTGTC CATCGGTCTG
GCCGACCGCA TCAACCTGCT CAAGGAAGAG GGTTTCCAGT CACGCCGCGC GGCCGAACAG
GCGGCGTTCG AAAGCCAGGC CAAGAGCCGC TTCCTGGCCA AGATGAGCCA CGAGATCCGC
ACCCCGCTCA ACGGCGTGCT GGGCATGCTG CAGCTGCTGC GCGAAACGCC GCTGGACCGC
AGCCAGCGCT TCTACGTCGA CACCATCTCC AGCTCCGGCA GCTCGCTGAT GGCGGTGATC
AACGACATCC TCGACTACGC CCGCATCGAG TCCGGCAAGC TCAGCCTGGA ACAGATCGAG
TTCGATCTCG AGGACATGAT CTCCGAGACC CTCAGCCTGT TCACCGGCCA GGCGCTGGAC
AAGCGCCTGC GCCTCTACGT CAGCCTCGAA GGCGGTGTGC CGCGGCGCAT CCAGGGTGAC
CCGACGCGGC TCAAGCAGGT GCTGATGAAC CTGCTCAGCA ATGCCTTGAA GTTCACCGCC
GAGGGCCATG TGGCGGTCAG CGTCAGCCGC CGCAGCGACA GCCATGGCCA GCCGCACCTG
GTGTTCGCCG TCAGCGACAG CGGCATCGGC ATCAGCGAGC AGGCCCTGGC CAAGCTGTTC
GAATCCTTCG CCCAGGGCGA CTCCAGCACC ACCCGTCGCT ACGGCGGCAG CGGTCTGGGC
CTGGCCATCA GCAAGGAGCT GGTGGAGATG ATGGGCGGCC GTATCGAGGT GCAGAGCACC
CCGGGCCAGG GCACCCGCTT CGCCTTCGAC ATCCCCCTGC TCGAAGCGCC GGAAGCGCCC
GACGACCTTG CCCGCCTGCT CGCCGGACGC ACGGCCCTGC TCGCCTCGCT CGACGGCCTG
GGCCTGGACG CCCTGAGTCG CCTGCTGGGC CGCTGGGGCA TGCGCACCGA ACGCTGCCAG
ACGCCCGAAC GTCTGCAGGA CTACCTGGAG GATTTCACCG CGCCGCCATT GCTGGTACTG
ATGGCGCCCT GGCCCGGCAG CGTCAACCAC TGGCTCGAGT CGCTGCGCCC CATGCTGCAA
CTGCAGCAGC GCGTGCTGCT GGTGTGCCCG CCCGAGGCCT GTCAGCAACT GCCCGAGAGC
AAGGGCCTGC GCCTGCAGCA CCTGGCCCAG CCGCTGGCGA TCAACGCCCT GCGCCAGGCC
CTGACCGGGC TGTACGAAGA ACCCAGAGCA CAGGTACATC ACTTGGTAAG AGAAGTACGC
AGCGACAAGG GCGACGCCCC CTGCATCCTC GTCGCCGAAG ACAACCCGGT TAATCAGCTG
GTGGTGCAGG GCTTCCTGAA GAAACGCGGC TACAGCGTGC GCTTGGTGAC CGACGGCCAG
GCCGCGGTGG ACGAATACAG TCGCGACCCA GCCGCCGTTC AGCTGATCCT GATGGATTGC
GAAATGCCGG TGATGGACGG TTTCGAAGCC ACCCGGCAGA TCCGTCGCCT GGAACACAGC
CAGCAACTCG GTGCCGTGCC CATCATCGCC CTGACCGCGC ATATCCTCGA CGAACACCGT
CAGCACGGCA TGGACGCCGG CATGGACGAC TTCCTCGGCA AGCCGCTGGA CAGCAAGCTG
CTCTACAGCA CCCTGGAGCG CTTTCTCAAG CTGCACAGCG CCTGA
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| Protein sequence | MPRLCLALLL FWLASPSWAL MPAPLDSDDL RLALGPYTGY YEDRDGSLSV EQVQALDDEA
FVRLEGEHAN LGKNAAVWWF KVRMVNGLQH ELGGYLEINY PLLDHLQVYL VTPDGSRLEQ
ESGDRYAFSQ RPVQVRNFWF PLQLQPGVST LLVRVETTST VFVPLFFSTY GASAAAQENL
MGFNGAFYGV LFAMFCYNLF LYLSLREAAY FWYLTYNLNV GLLAACFDGM LFKLLPEHVA
FQSVSIYILM YLHCLTAIQF SRHFLHARQY FPRLDTGLRL LMLACAGILV SVPLIGLTVW
NILASVTVSL VSLALLLTGL YVWRRGVRYG SYYTLAWAIM LFAFIQATTG SLGLEVFGVF
GATAVKIGVT IELITLSIGL ADRINLLKEE GFQSRRAAEQ AAFESQAKSR FLAKMSHEIR
TPLNGVLGML QLLRETPLDR SQRFYVDTIS SSGSSLMAVI NDILDYARIE SGKLSLEQIE
FDLEDMISET LSLFTGQALD KRLRLYVSLE GGVPRRIQGD PTRLKQVLMN LLSNALKFTA
EGHVAVSVSR RSDSHGQPHL VFAVSDSGIG ISEQALAKLF ESFAQGDSST TRRYGGSGLG
LAISKELVEM MGGRIEVQST PGQGTRFAFD IPLLEAPEAP DDLARLLAGR TALLASLDGL
GLDALSRLLG RWGMRTERCQ TPERLQDYLE DFTAPPLLVL MAPWPGSVNH WLESLRPMLQ
LQQRVLLVCP PEACQQLPES KGLRLQHLAQ PLAINALRQA LTGLYEEPRA QVHHLVREVR
SDKGDAPCIL VAEDNPVNQL VVQGFLKKRG YSVRLVTDGQ AAVDEYSRDP AAVQLILMDC
EMPVMDGFEA TRQIRRLEHS QQLGAVPIIA LTAHILDEHR QHGMDAGMDD FLGKPLDSKL
LYSTLERFLK LHSA
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