| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2955 |
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| Symbol | |
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| ID | 5107673 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 3277707 |
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| End bp | 3279476 |
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| Gene Length | 1770 bp |
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| Protein Length | 589 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640504213 |
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| Product | asparagine synthase (glutamine-hydrolyzing) |
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| Protein accession | YP_001188442 |
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| Protein GI | 146307977 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0367] Asparagine synthase (glutamine-hydrolyzing) |
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| TIGRFAM ID | [TIGR01536] asparagine synthase (glutamine-hydrolyzing)
[TIGR03104] asparagine synthase family amidotransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.0385583 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGCGGAA TAGCAGGAGA ACTACGTTTT GATCGACGCC CCGCGGATCT GGCGGCTGTC
GAACGCATCA CCCACCACCT GGCCCCTCGC GGCCCAGACG CCCACGGCTT TCACAGCCAG
GGCCCCATCG CCCTCGGCCA CCGCCGCCTG AAGATCATGG ACCTGGCGGA AGCCTCGGGC
CAGCCGATGA TCGACAGCGA TCTCGGCCTG TCCATGGTGT TCAACGGCGC CATCTACAAC
TACCCCGAAC TGCGTACCGA ACTGGAGACG CTGGGCTATC GCTTCTTCTC CGGTGGCGAC
ACCGAAGTGC TGCTCAAGGG CTATCACGCC TGGGGCGAAA AGCTGCTGCC CAAGCTCAAC
GGCATGTTCG CCTTCGCCGT GTGGGAGCGC GACAAGCAGA GCCTGTTCAT CGCCCGCGAC
CGCCTCGGCG TCAAGCCGCT GTACCTGTCG CGCACCGGCG AGCGCCTGCG CTTCGCTTCC
TCGCTGCCGG CCCTGCTGCA AGGCGGCGAC ATCGCCAAGA CGCTGGACGC CGTGGCGCTG
AACCATTACC TGAATTTCCA TGCCGTGGTG CCGGCGCCGC GCACCATCCT CGCCGGCGTG
GAGAAACTGC CGCCCGCCAC CTGGATGCGC ATCGATGCCG AGGGCAGGAC CGAGCAGCAC
CGCTGGTGGT CGCTCGAGTT CGGCCCGCGA GGCGAGGAAG CAGGCTACGA CTTCGAGGAC
TGGCGCGAAC AGGTGCTGGG CACCATGCGC GAAGCGGTCG CCATCCGCCA GCGCGCCGCG
GTGGACGTCG GCGTGCTGCT GTCCGGCGGC GTCGATTCGA GCATGCTGGT CGGCCTGCTG
CGCGAAGCCG GGGTGGAGAA CCTGCTGACC TTCTCCATAG GCTTTCAGGA TGCCGGCGGT
GAACGTGGCG ACGAATTCCA GTATTCGGAT CTGATCGCCC GCCACTTCGC CACCCGTCAT
CACCAGCTGC GCATCGGCGA GCACGAGATT ATCGAGCAGT TGCCGCAGGC CTTCCGCGCC
ATGAGCGAGC CGATGGTCAG CCACGACTGC ATCGCCTTCT ACCTGCTCTC GCGTGAAGTG
GCCAAGCACT GCAAGGTGGT GCAGAGCGGC CAGGGCGCCG ACGAGCTGTT CGCCGGTTAC
CACTGGTACC CGCTGGTCGA CGGCGCCGAT GACGCCTTCG CCGCCTACCG CGCCGCCTTC
TTCGACCGCG AGCATGACGA GTATGCCGCC TGCGTGCGCC CGGCCTGGCT CACCGGCGAC
ATGGCCGGCG AGTTCGTTCG CGAGCATTTC GCCCAACCCG GCGCCGATGC GGCGGTGGAC
AAGGCGCTGC GCCTGGACAG CACGGTGATG CTGGTGGACG ACCCGGTCAA GCGGGTGGAC
AACATGACCA TGGCCTGGGG CCTGGAAGCG CGCACGCCGT TCCTCGACTA CCGCGTGGCC
GAGCTGTCGG CGCGCATTCC GGCGCGCTTC AAGCTGCCCG AGGGAGGCAA GTACGTGCTC
AAGGAAGCCG CACGCAAGGT CATTCCAAGC GAAGTGATCG ACCGCCCCAA AGGCTACTTC
CCGGTACCGG GTCTCAAGCA TCTGGAAGGT GCCACCCTCG GCTGGGTGCG CGATCTGCTG
CTTGATCCCA GCCAGGATCG CGGCCTGTTC AACCCGACCA TGCTCGACCA GCTGCTGACC
AACCCGCAAA ACCAGCTGAC GCCGCTGCGC GGTTCCAAGC TGTGGCAGCT GGCGGCGCTC
AACCTGTGGC TGAGCGAACA GGGTCTGTAA
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| Protein sequence | MCGIAGELRF DRRPADLAAV ERITHHLAPR GPDAHGFHSQ GPIALGHRRL KIMDLAEASG
QPMIDSDLGL SMVFNGAIYN YPELRTELET LGYRFFSGGD TEVLLKGYHA WGEKLLPKLN
GMFAFAVWER DKQSLFIARD RLGVKPLYLS RTGERLRFAS SLPALLQGGD IAKTLDAVAL
NHYLNFHAVV PAPRTILAGV EKLPPATWMR IDAEGRTEQH RWWSLEFGPR GEEAGYDFED
WREQVLGTMR EAVAIRQRAA VDVGVLLSGG VDSSMLVGLL REAGVENLLT FSIGFQDAGG
ERGDEFQYSD LIARHFATRH HQLRIGEHEI IEQLPQAFRA MSEPMVSHDC IAFYLLSREV
AKHCKVVQSG QGADELFAGY HWYPLVDGAD DAFAAYRAAF FDREHDEYAA CVRPAWLTGD
MAGEFVREHF AQPGADAAVD KALRLDSTVM LVDDPVKRVD NMTMAWGLEA RTPFLDYRVA
ELSARIPARF KLPEGGKYVL KEAARKVIPS EVIDRPKGYF PVPGLKHLEG ATLGWVRDLL
LDPSQDRGLF NPTMLDQLLT NPQNQLTPLR GSKLWQLAAL NLWLSEQGL
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