Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_2955 |
Symbol | |
ID | 5107673 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 3277707 |
End bp | 3279476 |
Gene Length | 1770 bp |
Protein Length | 589 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640504213 |
Product | asparagine synthase (glutamine-hydrolyzing) |
Protein accession | YP_001188442 |
Protein GI | 146307977 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0367] Asparagine synthase (glutamine-hydrolyzing) |
TIGRFAM ID | [TIGR01536] asparagine synthase (glutamine-hydrolyzing) [TIGR03104] asparagine synthase family amidotransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.0385583 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTGCGGAA TAGCAGGAGA ACTACGTTTT GATCGACGCC CCGCGGATCT GGCGGCTGTC GAACGCATCA CCCACCACCT GGCCCCTCGC GGCCCAGACG CCCACGGCTT TCACAGCCAG GGCCCCATCG CCCTCGGCCA CCGCCGCCTG AAGATCATGG ACCTGGCGGA AGCCTCGGGC CAGCCGATGA TCGACAGCGA TCTCGGCCTG TCCATGGTGT TCAACGGCGC CATCTACAAC TACCCCGAAC TGCGTACCGA ACTGGAGACG CTGGGCTATC GCTTCTTCTC CGGTGGCGAC ACCGAAGTGC TGCTCAAGGG CTATCACGCC TGGGGCGAAA AGCTGCTGCC CAAGCTCAAC GGCATGTTCG CCTTCGCCGT GTGGGAGCGC GACAAGCAGA GCCTGTTCAT CGCCCGCGAC CGCCTCGGCG TCAAGCCGCT GTACCTGTCG CGCACCGGCG AGCGCCTGCG CTTCGCTTCC TCGCTGCCGG CCCTGCTGCA AGGCGGCGAC ATCGCCAAGA CGCTGGACGC CGTGGCGCTG AACCATTACC TGAATTTCCA TGCCGTGGTG CCGGCGCCGC GCACCATCCT CGCCGGCGTG GAGAAACTGC CGCCCGCCAC CTGGATGCGC ATCGATGCCG AGGGCAGGAC CGAGCAGCAC CGCTGGTGGT CGCTCGAGTT CGGCCCGCGA GGCGAGGAAG CAGGCTACGA CTTCGAGGAC TGGCGCGAAC AGGTGCTGGG CACCATGCGC GAAGCGGTCG CCATCCGCCA GCGCGCCGCG GTGGACGTCG GCGTGCTGCT GTCCGGCGGC GTCGATTCGA GCATGCTGGT CGGCCTGCTG CGCGAAGCCG GGGTGGAGAA CCTGCTGACC TTCTCCATAG GCTTTCAGGA TGCCGGCGGT GAACGTGGCG ACGAATTCCA GTATTCGGAT CTGATCGCCC GCCACTTCGC CACCCGTCAT CACCAGCTGC GCATCGGCGA GCACGAGATT ATCGAGCAGT TGCCGCAGGC CTTCCGCGCC ATGAGCGAGC CGATGGTCAG CCACGACTGC ATCGCCTTCT ACCTGCTCTC GCGTGAAGTG GCCAAGCACT GCAAGGTGGT GCAGAGCGGC CAGGGCGCCG ACGAGCTGTT CGCCGGTTAC CACTGGTACC CGCTGGTCGA CGGCGCCGAT GACGCCTTCG CCGCCTACCG CGCCGCCTTC TTCGACCGCG AGCATGACGA GTATGCCGCC TGCGTGCGCC CGGCCTGGCT CACCGGCGAC ATGGCCGGCG AGTTCGTTCG CGAGCATTTC GCCCAACCCG GCGCCGATGC GGCGGTGGAC AAGGCGCTGC GCCTGGACAG CACGGTGATG CTGGTGGACG ACCCGGTCAA GCGGGTGGAC AACATGACCA TGGCCTGGGG CCTGGAAGCG CGCACGCCGT TCCTCGACTA CCGCGTGGCC GAGCTGTCGG CGCGCATTCC GGCGCGCTTC AAGCTGCCCG AGGGAGGCAA GTACGTGCTC AAGGAAGCCG CACGCAAGGT CATTCCAAGC GAAGTGATCG ACCGCCCCAA AGGCTACTTC CCGGTACCGG GTCTCAAGCA TCTGGAAGGT GCCACCCTCG GCTGGGTGCG CGATCTGCTG CTTGATCCCA GCCAGGATCG CGGCCTGTTC AACCCGACCA TGCTCGACCA GCTGCTGACC AACCCGCAAA ACCAGCTGAC GCCGCTGCGC GGTTCCAAGC TGTGGCAGCT GGCGGCGCTC AACCTGTGGC TGAGCGAACA GGGTCTGTAA
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Protein sequence | MCGIAGELRF DRRPADLAAV ERITHHLAPR GPDAHGFHSQ GPIALGHRRL KIMDLAEASG QPMIDSDLGL SMVFNGAIYN YPELRTELET LGYRFFSGGD TEVLLKGYHA WGEKLLPKLN GMFAFAVWER DKQSLFIARD RLGVKPLYLS RTGERLRFAS SLPALLQGGD IAKTLDAVAL NHYLNFHAVV PAPRTILAGV EKLPPATWMR IDAEGRTEQH RWWSLEFGPR GEEAGYDFED WREQVLGTMR EAVAIRQRAA VDVGVLLSGG VDSSMLVGLL REAGVENLLT FSIGFQDAGG ERGDEFQYSD LIARHFATRH HQLRIGEHEI IEQLPQAFRA MSEPMVSHDC IAFYLLSREV AKHCKVVQSG QGADELFAGY HWYPLVDGAD DAFAAYRAAF FDREHDEYAA CVRPAWLTGD MAGEFVREHF AQPGADAAVD KALRLDSTVM LVDDPVKRVD NMTMAWGLEA RTPFLDYRVA ELSARIPARF KLPEGGKYVL KEAARKVIPS EVIDRPKGYF PVPGLKHLEG ATLGWVRDLL LDPSQDRGLF NPTMLDQLLT NPQNQLTPLR GSKLWQLAAL NLWLSEQGL
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