| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2953 |
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| Symbol | |
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| ID | 5107671 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 3275418 |
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| End bp | 3276491 |
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| Gene Length | 1074 bp |
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| Protein Length | 357 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640504208 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_001188440 |
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| Protein GI | 146307975 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.0291809 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGCCC CACGCGTTCG CCTCGGCGAC CTTTCCGTCG GCTTCACGCA GGCATTGGCG
GCAGCCCTGC GCGAGCACGG CCATGACCCG CAACCGCTGC TGGAACAGTT CGGCCTGGAG
GCCACACGCC TGAGCGAGCC GCGGGCACGC CTGTCGATTC CGCGCTTCAT GCGTCTTGGC
CACAGCGCCA TCGCCCTGTG CAAGGACCCG GCGCTGGGCC TGGACATGGG CCGCCATAGC
CGCCTGAGCC AGATCGGCCT GGCCGGCGTG TGCGCCGCCC AGGCGCCGAC GCTGCGCGAA
GCGGCGCGCG CCCTGACCCG TTTCGAAGCG CTGTACGCAG CCAACTACCG CGGCAGCTCG
GGCCTGGTCG AAGATGCCCG TGGCGCCTGG CTGCACTTCT ATTCCATCAG CCCGTACAAC
GCCTACAACC ACTTCGTCGT CGACTCGGTA CTGGCCGGCT GGCAGGTCAA TCTCGGCCAG
GTGGCCGGCC GCCCGGTTAC TGTGGAAAAA GTGGAAATCG AATTTCCCGC GCCCGCCTAC
GCCGAACGCT ACGAGGCCCT GTTCGGCTGT GCGGTGGAAT TCGAGGCCGG CGCCAATCGC
CTGCGCCTGA GCGCTGAAAG CCTGGCGCTG CGCAATCCGG ACCATTGCCC GGGCACCTGG
CACCACCTGC TGGAGTTGTG CGAACGCGAG CTGGACCAGC TGACCCGCAC GCGCAGCCTG
CGCGAACGGG TGATCCAGCT GCTCGGCCCG CTGCTGCACG GTCGCGAGCC GGATCTGCAG
GAAGTGGCCG GTCAGCTGCA ACTACCGGCC TGGACGCTAC GGCGCAAGCT GGCCGAGGAA
GGCACGCAGT TTCGCGCCAT CCTCAACGAT ACCCGCCGCG ATCTGGCCAC GGCCTATATC
CGCGACACCG AACTGGCGTT CGGCGAGATC GCCTACCTGC TCGGCTTCGC CTCGGCCGAG
GCCTTCCAGC GCGCGTTCAA GCGCTGGCTC GGACAGACGC CCGGCGACTA TCGCCGCGCG
CAGCGCAGGG CCAGCGGTGA AGCTCAGAGC TCGGTGGCGT CATCCACGTC CTGA
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| Protein sequence | MKAPRVRLGD LSVGFTQALA AALREHGHDP QPLLEQFGLE ATRLSEPRAR LSIPRFMRLG
HSAIALCKDP ALGLDMGRHS RLSQIGLAGV CAAQAPTLRE AARALTRFEA LYAANYRGSS
GLVEDARGAW LHFYSISPYN AYNHFVVDSV LAGWQVNLGQ VAGRPVTVEK VEIEFPAPAY
AERYEALFGC AVEFEAGANR LRLSAESLAL RNPDHCPGTW HHLLELCERE LDQLTRTRSL
RERVIQLLGP LLHGREPDLQ EVAGQLQLPA WTLRRKLAEE GTQFRAILND TRRDLATAYI
RDTELAFGEI AYLLGFASAE AFQRAFKRWL GQTPGDYRRA QRRASGEAQS SVASSTS
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