| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2952 |
|---|
| Symbol | |
|---|
| ID | 5107670 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas mendocina ymp |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009439 |
|---|
| Strand | + |
|---|
| Start bp | 3274396 |
|---|
| End bp | 3275421 |
|---|
| Gene Length | 1026 bp |
|---|
| Protein Length | 341 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640504207 |
|---|
| Product | Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase |
|---|
| Protein accession | YP_001188439 |
|---|
| Protein GI | 146307974 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 41 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 0.093499 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGATTAC TGATCAGCAT CGCCCTGTCA CTCGTCCTGC TCGCCGGTAT CGGCGGCTAT
GTCTACTGGA GCGAGCAGCG CAGCAGCGGC CACTATCTAT CCGACCTGCG CAGCCAGGTG
GCGCTCGAGC TCGGCCAGCC CAGTGCGCGC GGCAACCTGC TGGGCATCCA GCCGGAGCTG
TTCGCCGGCG ACTACCAGAG CCTCGGCCGC CTGCGCCTGA AACTCGCCGC CTATCTGGAC
CATGCCCGCG ACCAGGGCAT GCTCAGCGAA CGCACTGTCG TCGTGCTGCC GGAACATATC
GGCACCTGGT TGCTGGCCGT GGGGGAAAAG GAAGAGTTCT ACCGCGCCGC GCAGCAACGC
CAGGCGCTGC ACTGGCTGGC CGCCAGCAAT CCGCTGGATT TCCTGCGCGC CTTCTTCGCC
GCCCAGGGCG GCTCGCGCCT GGACGACGCC CTGCTGCGGA CCAAGGCGCA GAAGATGGCG
CGCGACTACC AGCAGCTGTT CGGCGAACTG GCCAGGGAGT ACGGCGTCAC CCTGGTGGCC
GGCTCCATCG TGCTGCCCGA ACCGCGGGTG GAGCTGGGCC GCCTCGAAGT CGGCCGCGGG
CCGCTGTACA ACGTCAGCCT GGTGTTCGAT CAGGCCGGTC ATCCGCTGGG CCAGCCGCAG
CGCCAGATCT TTCCCAGCGG CCCGATCACG GCCGCCGCCC CGAACAGCCT GCAGGTACTC
GACACCCCGG CCGGACGGCT TGGCGTTCTG CTCGGCAGCG ACGCGCTGCA CAGCGCCAGC
CACAGCGCCC TGGTCAGCCA GCAGGTCGAA CTGCTGGCCA TGCCCGGCGA CCTGGATGCC
GTGGCAAACG ATGCGCAGCT GGGTGAACAG CTCCAGGCCA ACGGCATCCG CGCCGGGCTG
AAGGTTCACC TGCGCGGCCG CCTGTGGGAA CGCCGCGGCC AGGCCCAGGC CCTGGCATTC
GATGCAGGCC GGCAGGCTCA TGGCGCCAGC GACAGCGGCG CTCAGCTGAT CAACCTGTGG
TTATGA
|
|---|
| Protein sequence | MRLLISIALS LVLLAGIGGY VYWSEQRSSG HYLSDLRSQV ALELGQPSAR GNLLGIQPEL
FAGDYQSLGR LRLKLAAYLD HARDQGMLSE RTVVVLPEHI GTWLLAVGEK EEFYRAAQQR
QALHWLAASN PLDFLRAFFA AQGGSRLDDA LLRTKAQKMA RDYQQLFGEL AREYGVTLVA
GSIVLPEPRV ELGRLEVGRG PLYNVSLVFD QAGHPLGQPQ RQIFPSGPIT AAAPNSLQVL
DTPAGRLGVL LGSDALHSAS HSALVSQQVE LLAMPGDLDA VANDAQLGEQ LQANGIRAGL
KVHLRGRLWE RRGQAQALAF DAGRQAHGAS DSGAQLINLW L
|
|---|
| |