Gene Pmen_2950 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_2950 
Symbol 
ID5107668 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp3271665 
End bp3272096 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content65% 
IMG OID640504205 
Producthypothetical protein 
Protein accessionYP_001188437 
Protein GI146307972 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.0421193 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTCTCG ACACCCAGTT GCATCCTGCT GCCGCAGCCA GCCTTGCGCG CTGGCACCAG 
TTCATCGCCG CCAAGGACCT GAGCGCCTTG CCCGAATTGC TGCATCCGCA GGCGGTGTTC
CGCTCGCCCA TGGCGCACAC CCCTTATCCG GGCGCGCAGG CGGTGAATCT GATCCTCAAT
ACCGTGCTCC AGGTGTTCGA GGATTTCGCC TATCACCGCG AGCTGGCCAC GGCCGATGGT
CTCAACGTCG TGCTGGAGTT CTCGGCGCGG GTGGGCGAGC GCGAACTCAA GGGCATCGAC
ATGATCCGTT TCGACGAGTC GGGGCGGATC GTCGAGTTCG AAGTGATGGT GCGCCCGATG
AGCGGGCTGC AGGCGCTCGG TGCGGAAATG GCGCAGCGCC TGGCGCCCTT CCTTTCCGCA
GCCAAGAGCT GA
 
Protein sequence
MSLDTQLHPA AAASLARWHQ FIAAKDLSAL PELLHPQAVF RSPMAHTPYP GAQAVNLILN 
TVLQVFEDFA YHRELATADG LNVVLEFSAR VGERELKGID MIRFDESGRI VEFEVMVRPM
SGLQALGAEM AQRLAPFLSA AKS