Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_2944 |
Symbol | ppnK |
ID | 5107662 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | - |
Start bp | 3264724 |
End bp | 3265611 |
Gene Length | 888 bp |
Protein Length | 295 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640504199 |
Product | inorganic polyphosphate/ATP-NAD kinase |
Protein accession | YP_001188431 |
Protein GI | 146307966 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0061] Predicted sugar kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.00985224 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 0.596503 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGCAAT TTCGCAATGT CGGCATCATC GGGCGCCTGG GGAGCACGCG GGTGCTGGAG ACCGTGCGCC GGCTCAAGCG CTTCCTCATC GACCGCCACC TGCACGTGAT CCTCGAGGAC ACCATTGCCG ACGTGCTGCC TGGGCACGGC CTGCAGACCT CCTCGCGCAA GATGCTCGGC GAAGTCTGCG ACCTGGTGAT CGTCGTCGGC GGCGACGGCA GCATGCTCGG CGCCGCCCGC GCCCTGGCGC GGCACAAGGT GCCGGTGCTG GGGATCAACC GCGGCAGCCT GGGTTTTCTC ACCGACATCC GCCCCGACGA GCTGGAACTC AAGGTGGCAC AGGTGCTCGA AGGTCAGTAC CTGACCGAGA ACCGCTTCCT GCTCGAGGCC GAGGTGCGCC GCCAGGGCGA GGCCATCGGG CAGGGCGATG CGCTCAACGA CGTGGTGCTG CACCCTGGCA AGTCGACGCG GATGATCGAG TTCGAGCTGT ACATCGATGG CCAGTTCGTC TGCAGCCAGA AGGCTGACGG CCTGATCGTC GCCACCCCGA CCGGCTCGAC TGCCTACGCG CTGTCTGCCG GCGGGCCGAT CATGCATCCC AAGCTCGATG CCATCGTGGT GGTGCCGATG TACCCGCACA CCCTGTCCAG CCGGCCCATC GTGGTCGATG GCAACAGCGA GCTGAAAGTG GTGGTGTCGC CGGACATGAC CATCTACCCG CAGGTCTCCT GCGACGGCCA AAACCACTTC ACCTGCGCGC CGGGCGATAC CCTGCACGTG GCCAAGAAGG CGCAGAAGCT GCGCCTGATC CATCCGCTGG ATCACAACTA TTACGAGGTC TGTCGCACCA AGCTCGGCTG GGGTAGCCGT CTCGGAGGGC ATGACTGA
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Protein sequence | MEQFRNVGII GRLGSTRVLE TVRRLKRFLI DRHLHVILED TIADVLPGHG LQTSSRKMLG EVCDLVIVVG GDGSMLGAAR ALARHKVPVL GINRGSLGFL TDIRPDELEL KVAQVLEGQY LTENRFLLEA EVRRQGEAIG QGDALNDVVL HPGKSTRMIE FELYIDGQFV CSQKADGLIV ATPTGSTAYA LSAGGPIMHP KLDAIVVVPM YPHTLSSRPI VVDGNSELKV VVSPDMTIYP QVSCDGQNHF TCAPGDTLHV AKKAQKLRLI HPLDHNYYEV CRTKLGWGSR LGGHD
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