Gene Pmen_2940 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_2940 
Symbol 
ID5107658 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp3261713 
End bp3262516 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content64% 
IMG OID640504195 
Producthypothetical protein 
Protein accessionYP_001188427 
Protein GI146307962 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0231953 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGCGC GTCTGGATGC GCCGGTGCAG TACGCCTTCC GCCTGGGCGA TGAGGAGGTG 
CCGGTCAACC CGCTGGTGGG CAAGCACCTG CGCCTGGAAT ACCTCGGCGC CATTCATTGC
ACGCACTGCG GGCGCAGGAC CAAGACCAGT TTCAGCCAGG GCTACTGCTA CCCCTGCATG
CAGAAGCTGG CGCAATGCGA TATCTGCATC ATGAGCCCGG AGAAGTGCCA CTTCGATCAG
GGCACCTGCC GCGAACCGAG CTGGGGCGAG CAGTTCTGCA TGACCGATCA TGTCGTGTAC
CTGGCCAACT CCAGCGGCGT GAAGGTCGGC ATCACCCGTG CCAGCCAGGT GCCGACGCGC
TGGATCGACC AGGGCGCGAC CCAGGCGCTG CCCATCCTGC GTGTGGCCAC CCGGCAGCAG
TCCGGTTTCG TCGAGGATCT GCTGCGCAGT CAGGTGGCGG ACAAGACCAA CTGGCGCGCA
TTGCTCAAGG GCGACGCCGC GCCGGTCGAC CTGATCGCGA TTCGCGAGCA ACTGTTCGCC
GCCTGTGCGG CGGGCATCAC CGAACTGCAG CAGCGTTTCG GCCTGCAGGC CGTCCAGCCG
TTGAGCGCAG CCGAGGTGCT GGAAATTCGT TACCCCATCG CGGCTTATCC GGCCAAGATC
ACCAGCTTCA ATCTGGACAA GCAGCCCCTG GCCGAGGGTA CCCTGCTCGG TATCAAGGGC
CAGTACCTGA TGTTCGACAC CGGCGTGATC AATATCCGCA AGTACACCGC CTATCAGTTG
GCCGTCCACG AGATCGCCGC CTGA
 
Protein sequence
MKARLDAPVQ YAFRLGDEEV PVNPLVGKHL RLEYLGAIHC THCGRRTKTS FSQGYCYPCM 
QKLAQCDICI MSPEKCHFDQ GTCREPSWGE QFCMTDHVVY LANSSGVKVG ITRASQVPTR
WIDQGATQAL PILRVATRQQ SGFVEDLLRS QVADKTNWRA LLKGDAAPVD LIAIREQLFA
ACAAGITELQ QRFGLQAVQP LSAAEVLEIR YPIAAYPAKI TSFNLDKQPL AEGTLLGIKG
QYLMFDTGVI NIRKYTAYQL AVHEIAA