Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_2940 |
Symbol | |
ID | 5107658 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | - |
Start bp | 3261713 |
End bp | 3262516 |
Gene Length | 804 bp |
Protein Length | 267 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640504195 |
Product | hypothetical protein |
Protein accession | YP_001188427 |
Protein GI | 146307962 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.0231953 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGGCGC GTCTGGATGC GCCGGTGCAG TACGCCTTCC GCCTGGGCGA TGAGGAGGTG CCGGTCAACC CGCTGGTGGG CAAGCACCTG CGCCTGGAAT ACCTCGGCGC CATTCATTGC ACGCACTGCG GGCGCAGGAC CAAGACCAGT TTCAGCCAGG GCTACTGCTA CCCCTGCATG CAGAAGCTGG CGCAATGCGA TATCTGCATC ATGAGCCCGG AGAAGTGCCA CTTCGATCAG GGCACCTGCC GCGAACCGAG CTGGGGCGAG CAGTTCTGCA TGACCGATCA TGTCGTGTAC CTGGCCAACT CCAGCGGCGT GAAGGTCGGC ATCACCCGTG CCAGCCAGGT GCCGACGCGC TGGATCGACC AGGGCGCGAC CCAGGCGCTG CCCATCCTGC GTGTGGCCAC CCGGCAGCAG TCCGGTTTCG TCGAGGATCT GCTGCGCAGT CAGGTGGCGG ACAAGACCAA CTGGCGCGCA TTGCTCAAGG GCGACGCCGC GCCGGTCGAC CTGATCGCGA TTCGCGAGCA ACTGTTCGCC GCCTGTGCGG CGGGCATCAC CGAACTGCAG CAGCGTTTCG GCCTGCAGGC CGTCCAGCCG TTGAGCGCAG CCGAGGTGCT GGAAATTCGT TACCCCATCG CGGCTTATCC GGCCAAGATC ACCAGCTTCA ATCTGGACAA GCAGCCCCTG GCCGAGGGTA CCCTGCTCGG TATCAAGGGC CAGTACCTGA TGTTCGACAC CGGCGTGATC AATATCCGCA AGTACACCGC CTATCAGTTG GCCGTCCACG AGATCGCCGC CTGA
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Protein sequence | MKARLDAPVQ YAFRLGDEEV PVNPLVGKHL RLEYLGAIHC THCGRRTKTS FSQGYCYPCM QKLAQCDICI MSPEKCHFDQ GTCREPSWGE QFCMTDHVVY LANSSGVKVG ITRASQVPTR WIDQGATQAL PILRVATRQQ SGFVEDLLRS QVADKTNWRA LLKGDAAPVD LIAIREQLFA ACAAGITELQ QRFGLQAVQP LSAAEVLEIR YPIAAYPAKI TSFNLDKQPL AEGTLLGIKG QYLMFDTGVI NIRKYTAYQL AVHEIAA
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