Gene Pmen_2937 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_2937 
Symbol 
ID5107655 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp3255122 
End bp3256492 
Gene Length1371 bp 
Protein Length456 aa 
Translation table11 
GC content64% 
IMG OID640504192 
Producthypothetical protein 
Protein accessionYP_001188424 
Protein GI146307959 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGAACA AGCACAGGCT GATGGCCGTA GCCGTTGCGC TGGCGTTTTC CGCCGGTTCC 
GCGCTGGCTG CCGTTTCCCC GCAGGAAGCC GCCAAACTCG GCGATACCCT GACTCCCTTC
GGTGCCGAGA AGGCCGGCAA CGCGGCCGGC ACCATCCCGG CCTGGACCGG TGGCATCACC
CAGGCGCCGG CCGGCTACAC CCGCTCGGGC CAGCACCACG TCAACCCGTT CCCGGAAGAC
AAGCCGCTGT TCACCATCAC CGCGGCCAAC CTGAGTCAGT ACGAGGCCAA CCTGACCCCG
GGTCAGATCG CCATGTTCAA GGCCTATCCG GAAACCTATC AGATGCCGGT GTACCAGACC
CGCCGCTCCG GCTCCGCGCC GCAGTGGGTC TATGACAACA CCATCAAGAA CGCCACCAGC
GCCAAGCTGG CCGATGGCGG CAACGGTTTC ACCAACGCCT ATGGCGGCAT TCCGTTCCCG
ATTCCGCAGA ACGGCGTCGA GGCTCTGTGG AACCACATCG CCCGCTACCG CGGCACCTAC
ATCGTGCGTC GCGCTTCGGA AGTGGCGGTG CAGCGCAACG GGTCGTACTC GCTGGTCACC
TCGCAGCAGG AGGCCATGTT CAAGTACTAC GTGCAGAACG GCTCCTTCGC CGACCTGAAC
AACATCATGT TCTACTACCT GTCGTTCACC ACCAGCCCGG CACGTCTGGC CGGTGGCGCG
ACCCTGGTTC ACGAGACCCT GGATCAGGTC AAGGAGCCGC GTCAGGCCTG GGGCTACAAC
GCCGGTCAAC GTCGCGTGCG TCGTGCGCCG AACCTGGCCT ACGACACGCC GATCGCCGCC
GCCGACGGTC TGCGCACCGC CGACGACACC GACATGTTCA ACGGTGCTCC GGATCGCTAC
GAGTGGAAGC TGGTAGGCAA GAAGGAAATC TACATCCCGT ACAACAACTA CAAGGTCACC
AGCCCCGACG TTAAGTACAA GGACCTGCTG CAGGTCGGCC ACCTGAACCC GGCCCTGACC
CGTAACGAGC TGCACCGCGT CTGGGTGGTG GAAGGCACGC TGAAGTCCGG CGCTCGCCAC
ATCTATTCCA AGCGTACCCT GTTCCTCGAC GAGGACAGCT GGCAGGCCGC CGTGGTCGAT
CAGTACGATG GTCGTGGCGA GCTGTGGCGC GTCTCCATCG CCTACCTGAA GAACTACTAC
GATCTGCCGA CCACCTGGTC CGCACTCGAC GTGTTCCACG ATCTGCAGGC GCGTCGCTAC
CACGTGCAGA ACCTGGACAA CGAAGAGAGC AACACCATCG ACTTCGGTCA GGCGATTCCG
GACGACGGCT ACTTCAAGCC GGCAGCCCTG CGTCGTCGCG GCACGCGATA A
 
Protein sequence
MLNKHRLMAV AVALAFSAGS ALAAVSPQEA AKLGDTLTPF GAEKAGNAAG TIPAWTGGIT 
QAPAGYTRSG QHHVNPFPED KPLFTITAAN LSQYEANLTP GQIAMFKAYP ETYQMPVYQT
RRSGSAPQWV YDNTIKNATS AKLADGGNGF TNAYGGIPFP IPQNGVEALW NHIARYRGTY
IVRRASEVAV QRNGSYSLVT SQQEAMFKYY VQNGSFADLN NIMFYYLSFT TSPARLAGGA
TLVHETLDQV KEPRQAWGYN AGQRRVRRAP NLAYDTPIAA ADGLRTADDT DMFNGAPDRY
EWKLVGKKEI YIPYNNYKVT SPDVKYKDLL QVGHLNPALT RNELHRVWVV EGTLKSGARH
IYSKRTLFLD EDSWQAAVVD QYDGRGELWR VSIAYLKNYY DLPTTWSALD VFHDLQARRY
HVQNLDNEES NTIDFGQAIP DDGYFKPAAL RRRGTR