Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_2937 |
Symbol | |
ID | 5107655 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | - |
Start bp | 3255122 |
End bp | 3256492 |
Gene Length | 1371 bp |
Protein Length | 456 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640504192 |
Product | hypothetical protein |
Protein accession | YP_001188424 |
Protein GI | 146307959 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGAACA AGCACAGGCT GATGGCCGTA GCCGTTGCGC TGGCGTTTTC CGCCGGTTCC GCGCTGGCTG CCGTTTCCCC GCAGGAAGCC GCCAAACTCG GCGATACCCT GACTCCCTTC GGTGCCGAGA AGGCCGGCAA CGCGGCCGGC ACCATCCCGG CCTGGACCGG TGGCATCACC CAGGCGCCGG CCGGCTACAC CCGCTCGGGC CAGCACCACG TCAACCCGTT CCCGGAAGAC AAGCCGCTGT TCACCATCAC CGCGGCCAAC CTGAGTCAGT ACGAGGCCAA CCTGACCCCG GGTCAGATCG CCATGTTCAA GGCCTATCCG GAAACCTATC AGATGCCGGT GTACCAGACC CGCCGCTCCG GCTCCGCGCC GCAGTGGGTC TATGACAACA CCATCAAGAA CGCCACCAGC GCCAAGCTGG CCGATGGCGG CAACGGTTTC ACCAACGCCT ATGGCGGCAT TCCGTTCCCG ATTCCGCAGA ACGGCGTCGA GGCTCTGTGG AACCACATCG CCCGCTACCG CGGCACCTAC ATCGTGCGTC GCGCTTCGGA AGTGGCGGTG CAGCGCAACG GGTCGTACTC GCTGGTCACC TCGCAGCAGG AGGCCATGTT CAAGTACTAC GTGCAGAACG GCTCCTTCGC CGACCTGAAC AACATCATGT TCTACTACCT GTCGTTCACC ACCAGCCCGG CACGTCTGGC CGGTGGCGCG ACCCTGGTTC ACGAGACCCT GGATCAGGTC AAGGAGCCGC GTCAGGCCTG GGGCTACAAC GCCGGTCAAC GTCGCGTGCG TCGTGCGCCG AACCTGGCCT ACGACACGCC GATCGCCGCC GCCGACGGTC TGCGCACCGC CGACGACACC GACATGTTCA ACGGTGCTCC GGATCGCTAC GAGTGGAAGC TGGTAGGCAA GAAGGAAATC TACATCCCGT ACAACAACTA CAAGGTCACC AGCCCCGACG TTAAGTACAA GGACCTGCTG CAGGTCGGCC ACCTGAACCC GGCCCTGACC CGTAACGAGC TGCACCGCGT CTGGGTGGTG GAAGGCACGC TGAAGTCCGG CGCTCGCCAC ATCTATTCCA AGCGTACCCT GTTCCTCGAC GAGGACAGCT GGCAGGCCGC CGTGGTCGAT CAGTACGATG GTCGTGGCGA GCTGTGGCGC GTCTCCATCG CCTACCTGAA GAACTACTAC GATCTGCCGA CCACCTGGTC CGCACTCGAC GTGTTCCACG ATCTGCAGGC GCGTCGCTAC CACGTGCAGA ACCTGGACAA CGAAGAGAGC AACACCATCG ACTTCGGTCA GGCGATTCCG GACGACGGCT ACTTCAAGCC GGCAGCCCTG CGTCGTCGCG GCACGCGATA A
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Protein sequence | MLNKHRLMAV AVALAFSAGS ALAAVSPQEA AKLGDTLTPF GAEKAGNAAG TIPAWTGGIT QAPAGYTRSG QHHVNPFPED KPLFTITAAN LSQYEANLTP GQIAMFKAYP ETYQMPVYQT RRSGSAPQWV YDNTIKNATS AKLADGGNGF TNAYGGIPFP IPQNGVEALW NHIARYRGTY IVRRASEVAV QRNGSYSLVT SQQEAMFKYY VQNGSFADLN NIMFYYLSFT TSPARLAGGA TLVHETLDQV KEPRQAWGYN AGQRRVRRAP NLAYDTPIAA ADGLRTADDT DMFNGAPDRY EWKLVGKKEI YIPYNNYKVT SPDVKYKDLL QVGHLNPALT RNELHRVWVV EGTLKSGARH IYSKRTLFLD EDSWQAAVVD QYDGRGELWR VSIAYLKNYY DLPTTWSALD VFHDLQARRY HVQNLDNEES NTIDFGQAIP DDGYFKPAAL RRRGTR
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