Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_2930 |
Symbol | |
ID | 5107648 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 3245212 |
End bp | 3246201 |
Gene Length | 990 bp |
Protein Length | 329 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640504185 |
Product | hypothetical protein |
Protein accession | YP_001188417 |
Protein GI | 146307952 |
COG category | [R] General function prediction only |
COG ID | [COG1721] Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGCGCGGCC TCCCCGGGCT GCATCCGGGC TATGGGCTGA AGCCCATGCA AACCCCAGCC AGCCACCCCG GCATCCACCT CGATCTCGCC GAACTGATCG AGATGCGCCA CCGCGTGCAC GAGGTGCCGC TGTTCTCCAC GCCGGCGCGG CGCAGCCCGC TGATCGGCCT GCATCACTCC AAGCTGCGTG GCCGTGGCGT GGACTTCGAT CAGGTGCGCG TCTACCAGCC CGGCGACGAC GTGCGCACCA TCGACTGGCG CGTCACCGCA CGCACCCAGG AGCCGCACAC CAAGCTGTTC CACGAGGAGC GCGAGCGCCC GATCTTCATC ATCGCCGAAC AGAGCCAGCG CCTGTTCTTC GGCTCCGGCC AGTGCTTCAA GTCGGTGCTG GCCGCGCGTG CCGCGGCGTT GATCGGCTGG GCCGCGCTCG GTCACAACGA CCGTATCGGC GGCCTGGTGT TCGCCGACAA CGAGCATCAC GAGGTCAAAC CGCGGCGCAG CAAGCAGAGC CTGCTGCAGC TGCTCAACCT GCTGGCCCGC GCCAACCAGG CGCTGGCCGC CGAAGCGCCG CCCGCGAGCC GCGACACCTT CGGCATGGCG CTGCGCCGCG CGCGCGAAGT GCTGCGCCCC GGCAGTCTGG TGATCGTGCT GTGCGACGAA CGCGCGCTGA GCGACAACGC CGAACAGCAA CTGACCCTGC TCGCGCGGCA TATCGATCTG CTGCTGCTGC CCTTGTCCGA CCCGCTCGAC CACGCCCTGC CCGCCGCCGG CCTGCTGCGC TTCACCCAGG CCGACGCACA GCTGGAGCTC GACAGCCATA ACGGCGACCT GCGCCAGGCC TACCGCGCCC AGGCGCAGGC ACGCGAAGCG CGCTGGCAGC GCCTGGCGCA GAAACTCGGC GTGCCGCTGC TGCCGCTGAG CACCCAGGCC GAGCTGGTCG AGCAGTTGCA GGAACAGCTC AGCGCACTGC GGCCGAGGAA GGTGGTATGA
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Protein sequence | MRGLPGLHPG YGLKPMQTPA SHPGIHLDLA ELIEMRHRVH EVPLFSTPAR RSPLIGLHHS KLRGRGVDFD QVRVYQPGDD VRTIDWRVTA RTQEPHTKLF HEERERPIFI IAEQSQRLFF GSGQCFKSVL AARAAALIGW AALGHNDRIG GLVFADNEHH EVKPRRSKQS LLQLLNLLAR ANQALAAEAP PASRDTFGMA LRRAREVLRP GSLVIVLCDE RALSDNAEQQ LTLLARHIDL LLLPLSDPLD HALPAAGLLR FTQADAQLEL DSHNGDLRQA YRAQAQAREA RWQRLAQKLG VPLLPLSTQA ELVEQLQEQL SALRPRKVV
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