Gene Pmen_2930 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_2930 
Symbol 
ID5107648 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp3245212 
End bp3246201 
Gene Length990 bp 
Protein Length329 aa 
Translation table11 
GC content70% 
IMG OID640504185 
Producthypothetical protein 
Protein accessionYP_001188417 
Protein GI146307952 
COG category[R] General function prediction only 
COG ID[COG1721] Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCGCGGCC TCCCCGGGCT GCATCCGGGC TATGGGCTGA AGCCCATGCA AACCCCAGCC 
AGCCACCCCG GCATCCACCT CGATCTCGCC GAACTGATCG AGATGCGCCA CCGCGTGCAC
GAGGTGCCGC TGTTCTCCAC GCCGGCGCGG CGCAGCCCGC TGATCGGCCT GCATCACTCC
AAGCTGCGTG GCCGTGGCGT GGACTTCGAT CAGGTGCGCG TCTACCAGCC CGGCGACGAC
GTGCGCACCA TCGACTGGCG CGTCACCGCA CGCACCCAGG AGCCGCACAC CAAGCTGTTC
CACGAGGAGC GCGAGCGCCC GATCTTCATC ATCGCCGAAC AGAGCCAGCG CCTGTTCTTC
GGCTCCGGCC AGTGCTTCAA GTCGGTGCTG GCCGCGCGTG CCGCGGCGTT GATCGGCTGG
GCCGCGCTCG GTCACAACGA CCGTATCGGC GGCCTGGTGT TCGCCGACAA CGAGCATCAC
GAGGTCAAAC CGCGGCGCAG CAAGCAGAGC CTGCTGCAGC TGCTCAACCT GCTGGCCCGC
GCCAACCAGG CGCTGGCCGC CGAAGCGCCG CCCGCGAGCC GCGACACCTT CGGCATGGCG
CTGCGCCGCG CGCGCGAAGT GCTGCGCCCC GGCAGTCTGG TGATCGTGCT GTGCGACGAA
CGCGCGCTGA GCGACAACGC CGAACAGCAA CTGACCCTGC TCGCGCGGCA TATCGATCTG
CTGCTGCTGC CCTTGTCCGA CCCGCTCGAC CACGCCCTGC CCGCCGCCGG CCTGCTGCGC
TTCACCCAGG CCGACGCACA GCTGGAGCTC GACAGCCATA ACGGCGACCT GCGCCAGGCC
TACCGCGCCC AGGCGCAGGC ACGCGAAGCG CGCTGGCAGC GCCTGGCGCA GAAACTCGGC
GTGCCGCTGC TGCCGCTGAG CACCCAGGCC GAGCTGGTCG AGCAGTTGCA GGAACAGCTC
AGCGCACTGC GGCCGAGGAA GGTGGTATGA
 
Protein sequence
MRGLPGLHPG YGLKPMQTPA SHPGIHLDLA ELIEMRHRVH EVPLFSTPAR RSPLIGLHHS 
KLRGRGVDFD QVRVYQPGDD VRTIDWRVTA RTQEPHTKLF HEERERPIFI IAEQSQRLFF
GSGQCFKSVL AARAAALIGW AALGHNDRIG GLVFADNEHH EVKPRRSKQS LLQLLNLLAR
ANQALAAEAP PASRDTFGMA LRRAREVLRP GSLVIVLCDE RALSDNAEQQ LTLLARHIDL
LLLPLSDPLD HALPAAGLLR FTQADAQLEL DSHNGDLRQA YRAQAQAREA RWQRLAQKLG
VPLLPLSTQA ELVEQLQEQL SALRPRKVV