| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2922 |
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| Symbol | |
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| ID | 5107640 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 3232132 |
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| End bp | 3232713 |
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| Gene Length | 582 bp |
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| Protein Length | 193 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640504177 |
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| Product | general secretion pathway protein H |
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| Protein accession | YP_001188409 |
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| Protein GI | 146307944 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2165] Type II secretory pathway, pseudopilin PulG |
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| TIGRFAM ID | [TIGR01708] general secretion pathway protein H
[TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.252681 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.157804 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGATAT CGGCAACTGG GATCTCTGAC CCCATCATGC CCGCGGCGGC ATCCTTCGGA
CGCAGGCACG GCTCTGCCCA GCGCGGTTTT ACCCTGATCG AGCTGCTGGT GGTGTTGGTC
ATCCTCGGCA GCTTGATCGG CCTGGCTGTG CTCAGCAGCG GCGTTGCCGG GCCTGGGCGC
GAGCTGCGCA GCGAGGCGGA GCGCCTGAGC GGGTTGATCG GCGTGCTCAG CGAGGAGGCG
GTGCTGGACA ATCGCGAGTA CGGCCTGAGC TTTACCCGCG AGGGCTACCG CGTGCTGCGC
TACGATCCGC AGCGCGGCGA ATGGCAGACG CTCGACCGGC AGGCCCATCG CCTGCCGGAG
TGGGCCGAGC TGCAGTTCGA AGTGGAAGGG GAGGCCCTGA ACCTGCCGAC CACCACTGGC
TCGGCCGCGG CGCCGCAACT GCTGATTCTC TCCAGCGGCG AGCTCACCCC CTTTCGTCTG
CGTCTGGCCG AGCGCCGCCG CGATGGCTTG CGCCTGCAGC TGTCCAGTGA CGGTTTCGCG
CTGCCGCGTC TGGAGGAATT GCCGACGGGA CGGGCCGGAT GA
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| Protein sequence | MPISATGISD PIMPAAASFG RRHGSAQRGF TLIELLVVLV ILGSLIGLAV LSSGVAGPGR
ELRSEAERLS GLIGVLSEEA VLDNREYGLS FTREGYRVLR YDPQRGEWQT LDRQAHRLPE
WAELQFEVEG EALNLPTTTG SAAAPQLLIL SSGELTPFRL RLAERRRDGL RLQLSSDGFA
LPRLEELPTG RAG
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