| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2915 |
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| Symbol | |
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| ID | 5107633 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 3226264 |
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| End bp | 3226953 |
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| Gene Length | 690 bp |
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| Protein Length | 229 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640504170 |
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| Product | polar amino acid ABC transporter, inner membrane subunit |
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| Protein accession | YP_001188402 |
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| Protein GI | 146307937 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4215] ABC-type arginine transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.149871 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTCAAG GCTATGGCTC GACCATACTC GATGGTGCCT GGCTCACCCT GCTTCTGGCG
CTTACGTCGA TGGCAGTGGC GATCTTTCTC GGTCTGCTCG GGGCGGCCTT TCGCCTGTCG
CCGGTCAGGT GGCTGGCGAT GCTCGGCGAG GCCTACGCCA CGGTGATCCG CGGCATTCCC
GACCTGGTGC TGATCCTGCT GATCTTCTAC GGCGGCCAGG ACATCGTGAA CCGCGTCGCG
CCGCTGCTCG GCTACGACGA GTACATCGAC ATCAACCCCT TCGTCGCCGG CGTGTTCACC
ATGGGCTTCA TCTTCGGCGC CTACCTGTCG GAGACCTTCC GCGGCGCCTT CATGGCCATT
CCCAAGGGGC AGGGCGAGGC CGGCGCAGCC TACGGCATGA GCGGGATGCA GGTGTTCTTC
CGCATCCTCG TGCCGCAGAT GATCCGTTTC GCCATTCCCG GCTTCACCAA CAACTGGCTG
GTGCTGACCA AGGCCACTGC GCTGATCTCG GTGGTCGGCC TGCAGGACAT GATGTTCAAG
GCCAAGAACG CGGCTGACGC GACCCGCGAG CCGTTCACCT TCTATCTGGC GGTGGCGGCG
CTGTATCTGG TGCTGACCAG CGTGTCGCTG CTGGCGCTGC GTTTCCTCGA GAAGCGTTAC
TCGGTAGGTA CCAAGGCGGC TGACCTATGA
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| Protein sequence | MLQGYGSTIL DGAWLTLLLA LTSMAVAIFL GLLGAAFRLS PVRWLAMLGE AYATVIRGIP
DLVLILLIFY GGQDIVNRVA PLLGYDEYID INPFVAGVFT MGFIFGAYLS ETFRGAFMAI
PKGQGEAGAA YGMSGMQVFF RILVPQMIRF AIPGFTNNWL VLTKATALIS VVGLQDMMFK
AKNAADATRE PFTFYLAVAA LYLVLTSVSL LALRFLEKRY SVGTKAADL
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