| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2914 |
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| Symbol | |
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| ID | 5107632 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 3225569 |
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| End bp | 3226267 |
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| Gene Length | 699 bp |
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| Protein Length | 232 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640504169 |
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| Product | polar amino acid ABC transporter, inner membrane subunit |
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| Protein accession | YP_001188401 |
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| Protein GI | 146307936 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4160] ABC-type arginine/histidine transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.285474 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATCTTCG ACTATCAAAT GATCTGGGAG AACCTGCCGC TGTATTTCAG TGGCGTGCTG
GTCACCCTGA AAATCCTGCT GATTTCCCTG GCCGTTGGCC TCAGCCTGGC ACTGCCGCTG
GCCCTGATGC GGGTGTCGAA GTCGCCCCTG GTCAACTTCC CGGCCTGGCT CTACACCTAC
GTGATCCGCG GCACGCCGAT GCTGGTGCAG CTGTTTCTGA TCTACTACGG CCTGGCCCAG
TTCGACGTCA TTCGCGACAG CTTCATGTGG CCGTATTTCT CCAGCGCCAC CTTCTGCGCC
TGCCTGGCCT TCGCCATCAA CACCAGCGCC TACACCGCAG AGATTCTCGC CGGCAGCCTC
AAGGCCACGC CCCATGGCGA GATCGAGGCA GCCAAGGCCA TGGGCATGTC GCGGGCCAAG
CTCTATCGTC GCATCCTGCT GCCGTCGGCG CTGCGCCGCG CGCTGCCGCA GTACAGCAAC
GAGGTGATCA TGATGCTGCA CACCACCTCG CTGGCCTCCA TCGTCACCCT GATCGACATC
ACCGGGGCGG CGCGTACGGT CAGTTCGCAG TACTACATGC CCTTCGAAGC CTTCATCACC
GCCGGCCTGT TCTATCTGGT GCTGACCTTC ATTCTGGTGC GCCTGTTCAA GCTGGCCGAG
CGTCGCTGGC TGGCCTACAT GGCCCCGCGC AAGACCTGA
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| Protein sequence | MIFDYQMIWE NLPLYFSGVL VTLKILLISL AVGLSLALPL ALMRVSKSPL VNFPAWLYTY
VIRGTPMLVQ LFLIYYGLAQ FDVIRDSFMW PYFSSATFCA CLAFAINTSA YTAEILAGSL
KATPHGEIEA AKAMGMSRAK LYRRILLPSA LRRALPQYSN EVIMMLHTTS LASIVTLIDI
TGAARTVSSQ YYMPFEAFIT AGLFYLVLTF ILVRLFKLAE RRWLAYMAPR KT
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