| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2912 |
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| Symbol | |
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| ID | 5107630 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 3223721 |
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| End bp | 3224701 |
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| Gene Length | 981 bp |
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| Protein Length | 326 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640504167 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_001188399 |
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| Protein GI | 146307934 |
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| COG category | [K] Transcription |
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| COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.299019 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCCCC ATCGAATTGG CTTCCTCTAC TGGCCCGGTA CCAAGGCCCT GACCCTGTCC
CTGGCCGAGG AAGCCCTGCG TGTCGCCCAG CGCGTGCATC CTGAAGTGGT GTACGAGCTG
GTCTTCCTCC AGGCCGAGCC GCTGGTGGCG GGTGACTGGC GCCTGCCGGG CGAGCCCTGG
GCGGGGCATC TGGATGGGCT GGACAAGCTG TTCCTGCTCG CCGATACACC GCCGGCGCAG
GTCTCTGCCG GGCTGGCGGC GGCGCTGAAG CAGCAGGTGC GTGCCGGCTG CGTGATTGGC
GGGCTGTCCG CCGGGGTCTA TCCACTGGCC CAGCTCGGCC TGCTCGATGG CTATCGCGCG
GCGGTGCACT GGCGCTGGCA GGACGATTTC GCCGAGCGCT TTCCCAAGGT CATCGCCACC
AGCCATCTGT TCGACTGGGA TCGTGATCGC CTGACTGCCT GCGGCGGCCT GGCGGTGCTC
GATCTTCTGC TGGCGCTGCT GGCGCGCGAC CACGGTGCCG AGCTGGCCGG GGCGGTGAGC
GAGGAGCTGG TGGTCGAGCG CATCCGCGAA GGCGGCGAGC GTCAGCGCAT TCCGCTGCAG
AATCGCCTCG GCTCCAGCCA TCCCAAGCTG ACCCAGGCAG TGCTGCTGAT GGAGGCCAAT
ATCGAAGAGC CGCTGACCAC CGACGAGATT GCCCAGCATG TGTGCGTCTC GCGTCGTCAG
CTCGAGCGCA TCTTCAAGCA GTACCTCAAT CGCGTGCCCA GCCAGTACTA CCTGGAGCTG
CGCCTGAACA AGGCGCGCCA GCTGCTGATG CAGACCAGCA AGTCGATCAT CCAGATCGGC
CTGTCCTGCG GCTTCTCCTC CGGGCCGCAT TTCTCCAGCG CCTACCGCAA CTTCTTCGGC
GCCACTCCGC GCGACGACCG CAACCAGCGG CGCAGCAACA GCCCCTTCGA ACTGACCTCC
ACCCCGGTCG AGCGCGGCTG A
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| Protein sequence | MTPHRIGFLY WPGTKALTLS LAEEALRVAQ RVHPEVVYEL VFLQAEPLVA GDWRLPGEPW
AGHLDGLDKL FLLADTPPAQ VSAGLAAALK QQVRAGCVIG GLSAGVYPLA QLGLLDGYRA
AVHWRWQDDF AERFPKVIAT SHLFDWDRDR LTACGGLAVL DLLLALLARD HGAELAGAVS
EELVVERIRE GGERQRIPLQ NRLGSSHPKL TQAVLLMEAN IEEPLTTDEI AQHVCVSRRQ
LERIFKQYLN RVPSQYYLEL RLNKARQLLM QTSKSIIQIG LSCGFSSGPH FSSAYRNFFG
ATPRDDRNQR RSNSPFELTS TPVERG
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