| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2892 |
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| Symbol | |
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| ID | 5107807 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 3201105 |
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| End bp | 3202241 |
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| Gene Length | 1137 bp |
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| Protein Length | 378 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640504143 |
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| Product | sodium ion-translocating decarboxylase, beta subunit |
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| Protein accession | YP_001188379 |
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| Protein GI | 146307914 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1883] Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit |
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| TIGRFAM ID | [TIGR01109] sodium ion-translocating decarboxylase, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.0351319 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAAAGC TGCTCAAGCT CTGGCAGAGC ACCGGCCTGT ACCATCTGGA GCCCGGTCAG
GCGTTCATGA TCGCGGTCTG CCTGGTACTG ATCTACCTGG CCATCAAAAA GGGGTTCGAG
CCCCTGCTGC TGGTTCCCAT CGGTTTCGGC GGTCTGCTGT CGAACATCCC GGTGGCCAAC
ATGGCCGAAG GCGCGGGTTT CCTGCACCTG ATCTATGAGG TGGGCCTGCC GACCAGCATC
TTCCCGTTGC TGATCTTCCT CGGCGTCGGC GCCATGACCG ATTTCGGTCC GATGCTGGCC
AACCCCAAGA CCCTGCTGCT GGGCGCCGCT GCGCAGTTCG GCATCTTCGG CACCCTGCTC
GGCGCCCTGG CGATCACCGC GCTGGGCATT CCCGGCATGG AGTTCACCCT CAAGGAGGCG
GCGTCCATCG CCATCATCGG CGGGGCGGAC GGGCCGACCT CGATCTTCGT CACCTCCAAG
CTCGCGCCCG ATCTGCTCGG TCCCATCGCC GTGGCGGCCT ATGCCTACAT GGCGCTGGTG
CCGCTGCTGC AACCGCCGAT CATGCGCGCG CTGACCACCA AGGAGGAGCG CGCCATCGTC
ATGCAGCAAC TGCGTCCGGT GGGGCAGACC GAGAAGATCA TCTTCCCCAT CGTGCTGTGC
ATTCTGGTGG GTATGCTGCT GCCCGACGCC GCGCCGCTTA TCGGCATGTT CGCCCTCGGC
AACCTGCTGC GCGAATGCGG GGTTGTCGAG CGCCTGGCCG ATACCTCGCG CAACGCGCTT
ATCAACATCG TCACCATCTT CCTCGGCCTG ACCGTGGGTT CCAAGCTGTC GGCAGAAGCC
TTCCTGCAGC TCAAGACCCT GGGCATCCTG CTGCTGGGCA TGGTGGCCTT CTGTGCCGGC
ACCGCTGCCG GGGTGCTGAT GGCCAAGCTG ATGAACCTGT TCAGCACGCA CAAGGTCAAC
CCGCTGATCG GCTCGGCCGG TGTGTCCGCG GTGCCGATGG CGGCAAGGGT TTCGAACAAG
GTGGGCCTGG AGGCCAACCC GCAGAACTTC CTGCTGATGC ACGCCATGGG ACCGAACGTG
GCCGGGGTGA TCGGCTCGGC GGTGGCGGCG GGGGTGTTGC TCAGCTTCGT CGGCTGA
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| Protein sequence | MEKLLKLWQS TGLYHLEPGQ AFMIAVCLVL IYLAIKKGFE PLLLVPIGFG GLLSNIPVAN
MAEGAGFLHL IYEVGLPTSI FPLLIFLGVG AMTDFGPMLA NPKTLLLGAA AQFGIFGTLL
GALAITALGI PGMEFTLKEA ASIAIIGGAD GPTSIFVTSK LAPDLLGPIA VAAYAYMALV
PLLQPPIMRA LTTKEERAIV MQQLRPVGQT EKIIFPIVLC ILVGMLLPDA APLIGMFALG
NLLRECGVVE RLADTSRNAL INIVTIFLGL TVGSKLSAEA FLQLKTLGIL LLGMVAFCAG
TAAGVLMAKL MNLFSTHKVN PLIGSAGVSA VPMAARVSNK VGLEANPQNF LLMHAMGPNV
AGVIGSAVAA GVLLSFVG
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