| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2889 |
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| Symbol | |
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| ID | 5107804 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 3198405 |
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| End bp | 3199406 |
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| Gene Length | 1002 bp |
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| Protein Length | 333 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640504140 |
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| Product | phosphonate ABC transporter, periplasmic phosphonate-binding protein |
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| Protein accession | YP_001188376 |
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| Protein GI | 146307911 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3221] ABC-type phosphate/phosphonate transport system, periplasmic component |
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| TIGRFAM ID | [TIGR01098] phosphate/phosphite/phosphonate ABC transporters, periplasmic binding protein
[TIGR03431] phosphonate ABC transporter, periplasmic phosphonate binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.0176609 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCAAAC GCATCGGCCA GGTGCTGGCT GCCTCTGCGC TCGTCACCGG TTCCCTGCTG
GGCTCGGTCC AGGCCGCCGA GGAACTCAAC TTCGGCATCA TCTCCACCGA GTCCTCGCAG
AATCTCAAGG CCATGTGGGA TCCCTTCCTG GCCGACATGA GCAAGCAGAC CGGAGTGAAG
ATCAACGCCT TCTTCGCGCC TGACTATGCC GGGATCATCC AGGGCATGCG CTTCGACAAG
GTCGACGTGG CCTGGTACGG CAACAAGTCG GCGATGGAAG CGGTGGACCG TGCCGGTGGC
GAGATCTTCG CCCAGACCGT GGCGGCCAAC GGCGCCCAGG GCTACTACAG CCTGCTGGTG
GCGCACAAGG ACAGCCCGAT CGACTCGGTC GAGGACATGC TCAAGAACGC CAAGAGCCTG
ACCTTCGCCA ACGGCGACCC GAACTCCACT TCCGGTTATC TGGTGCCCGG TTACTACGTG
TTCGCCCAGA ACAACGCCGA CGCCGGCAAG ATCTTCAAGC GCTCGCTCAA CGGCAGTCAT
GAGGTCAACG CGCTGTCGGT GGCCAACAAG CAGGTCGATG TCGGCACCTT CAACAGCGAG
GGCATGGAGC GTCTGGAAGT GACCGCGCCG GACAAGGCCG CGCAGCTCAA GGTGATCTGG
ACCTCGCCGC TGATCCCGTC CGACCCCATC GTCTGGCGCA AGAACCTGCC GCAGGAAACC
CGCGACAAGC TGCGCGACTT CTTCATGACC TACGGTGCCA AGCCGGAGGA GAAGAAGGTG
CTCGAAGGTC TGCAGTGGGG CCAGTTCAAG CCTTCCGACA ACGATCAGTT GCTGCCGATT
CGTCAGCTCG AGCTGTTCAA GAAGCGCACC GAAGTGGCCA ACAACGACAA GCTCAAGGAC
GCCGACAAGC AGGCTCAGCT CAAGGAGCTG GACGCCGAGC TGGCCAAGCT GGAGCAGCGC
ATGGCCGAGC GTGAGAAGCA GGGCGGCGCC AGCGCCGGTT GA
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| Protein sequence | MFKRIGQVLA ASALVTGSLL GSVQAAEELN FGIISTESSQ NLKAMWDPFL ADMSKQTGVK
INAFFAPDYA GIIQGMRFDK VDVAWYGNKS AMEAVDRAGG EIFAQTVAAN GAQGYYSLLV
AHKDSPIDSV EDMLKNAKSL TFANGDPNST SGYLVPGYYV FAQNNADAGK IFKRSLNGSH
EVNALSVANK QVDVGTFNSE GMERLEVTAP DKAAQLKVIW TSPLIPSDPI VWRKNLPQET
RDKLRDFFMT YGAKPEEKKV LEGLQWGQFK PSDNDQLLPI RQLELFKKRT EVANNDKLKD
ADKQAQLKEL DAELAKLEQR MAEREKQGGA SAG
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