| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2873 |
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| Symbol | |
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| ID | 5107788 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 3181596 |
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| End bp | 3182228 |
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| Gene Length | 633 bp |
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| Protein Length | 210 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640504123 |
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| Product | ECF subfamily RNA polymerase sigma-24 factor |
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| Protein accession | YP_001188360 |
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| Protein GI | 146307895 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 0.444727 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAATGTT CTCGACAGTC ATTGCCGGCG CCAGGCCGGA GAGGTTCCCG GCGGTCTTTT
GCAGCGAATG CGCCGACCTA TGATCATTCT GCTGCGGTCC TTGACCACAA GGCTTTGCTG
GCGGCCTATC AGGCTCAGCG TCATGCATTG CTCAATCTGG CGACGCGAGT TCTGGGATGT
CGCAGCAGAG CCGAGGATGT CCTGCAGGAT GCCTTTCTCA AGCTGTGGGA GGGCAGCCTC
AATCTCTCCC GGGTGGATGC GCCCGAGCGC TACTTGACTC GCCTGGTACG CAACCTGTCC
ATCGACCACT TGCGGCGCCT GCAGCTGGAG CAGCGCCACG GTGCCGCCGG CGAACTGGCG
GATCTGCAGC CTTCGGAAAT CTCGCCAGAA CAGGCCGTAG GCGGACAGCA GGCCGTGCGC
CAGTTGCTCG ATGCGCTGGC GGAGCTGACG CCGCGGATGC GCCGGGTTTT CACCCTCAGT
CAGCTGGACG GCCTCACCCA GCGCGAGGTG GCGACTCAAC TGGGCGCTTC GCCAGCGCTC
ATCAGCCTGA TCCTGCGCGA TACCCTGGGA CATTGTCGTG TCCGACTCGA CGGGCAGTGC
GCGCGCAACT GTCCCCTGGC CAAGAGGTTC TGA
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| Protein sequence | MECSRQSLPA PGRRGSRRSF AANAPTYDHS AAVLDHKALL AAYQAQRHAL LNLATRVLGC
RSRAEDVLQD AFLKLWEGSL NLSRVDAPER YLTRLVRNLS IDHLRRLQLE QRHGAAGELA
DLQPSEISPE QAVGGQQAVR QLLDALAELT PRMRRVFTLS QLDGLTQREV ATQLGASPAL
ISLILRDTLG HCRVRLDGQC ARNCPLAKRF
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