| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2868 |
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| Symbol | |
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| ID | 5107783 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 3151270 |
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| End bp | 3152691 |
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| Gene Length | 1422 bp |
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| Protein Length | 473 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640504118 |
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| Product | diaminobutyrate--2-oxoglutarate aminotransferase |
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| Protein accession | YP_001188355 |
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| Protein GI | 146307890 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0160] 4-aminobutyrate aminotransferase and related aminotransferases |
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| TIGRFAM ID | [TIGR00709] 2,4-diaminobutyrate 4-transaminases |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0365956 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.0647409 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAATTG AACCGCATTA CGATCCGCTG CCCATGCCTG TCGCGCTCGA TCTCGGCCCG
GAAGCGACGC TGCGTGGCGC TGACTACCGC TTCGCCAGCA CGGCCAGGCT GCAGCACCAG
AGCGAGGTGG AGTCCAACGC GCGCAGCTAT CCCAGGCGCA TCCCGCTGGA GCTACGCCGC
GCCGAGGGCA TCCATGTGCA GGATAGCGAA GGGCGCTGGT TCATCGATTG CCTGGCCGGT
GCCGGCACCC TGGCCCTTGG GCATAACCAT CCCGTCGTTC TGCAGGCCAT TCGCGGCCTG
CTCGATGGCA AGCGACCGCT GCACACTCTG GACCTGATGA CCGAAGCCAA GGACGAATTC
ATCAACGAGC TGTTCGCCTG TCTGCCGGCC GAGTTCGCCC GCGATGCGCG CATCCAGTTC
TGCGGGCCGG CCGGCACCGA TGCGGTGGAG GCGGCATTGA AACTGGTGCG CACGGCCACC
GGGCGTAGCC AGATGCTGGC CTTCCATGGC GCCTACCACG GCATGACTCA GGGCGCCCTG
AGCCTGATGG GCAGCTTGGG GCCCAAGCAG TATCTGGACG GCATGATCAG TGGCGTGCAG
ATGCTGCCGT ACCCTTACGG CTACCGCTGC CCGTTCGGCC TGGGCGGTGC CGAAGGCGAG
CGCGTCGGTC TGCATTACAT CGAGAACCAG CTAGGCGACC CGGAAAGCGG CGTGCTGCCG
GCGGCCGGCA TGATTCTCGA AACGGTACAG GGCGAGGGCG GGGTGATCGC TCCGTCCGCC
GACTGGTTGC GCGGCATTCG GCGCATCACC CGCGAGGCCG GCGTGCCGCT GATTCTCGAT
GAGGTGCAGT GCGGTATCGG GCGCACCGGC AAGCTGTTCG CCTTCGAGCA TGCCGGCATC
ACGCCGGACG TGCTGGTGCT GTCCAAGGCC ATCGGCGGCA GCCTGCCGCT GGCGGTGGTG
GTCTACCACA AGGATCTCGA CCGCTGGCAG CCGGGGGCGC ACGCTGGCAC CTTCCGTGGC
AACCAGATGG CCATGGCAGC AGGCGCGGCC ACCTTGCGCC TGATCCGCGA AGAGCGTCTG
GATCAGCACG CCGCCACCAT GGGCGAACGC CTCTGCGCTC ACCTGCAGGC CTTGCAGGCA
GGTTACCCGC AGATCGGTGA AGTGCGTGGC AGGGGGCTGA TGCTCGGGGT GGAGATGGTC
GATCCACAGG GCAGGGCGGA CGCCATGGGG CGCGCACCGC ACAACCGCGC GCTGGCCTCG
GCCGTGCAGC AGCAGTGCCT GCGTCGTGGC CTGATTCTGG AGGTGGGCGG GCGCCATTCC
AGCGTTCTGC GTCTGCTGCC GCCGCTGATC ATCACGGCGG CACAGGTGGA TCAGGTGGCG
GATATCTTCG CCAGCGCGCT CGACGCTGCA GTGAACCACT AA
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| Protein sequence | MQIEPHYDPL PMPVALDLGP EATLRGADYR FASTARLQHQ SEVESNARSY PRRIPLELRR
AEGIHVQDSE GRWFIDCLAG AGTLALGHNH PVVLQAIRGL LDGKRPLHTL DLMTEAKDEF
INELFACLPA EFARDARIQF CGPAGTDAVE AALKLVRTAT GRSQMLAFHG AYHGMTQGAL
SLMGSLGPKQ YLDGMISGVQ MLPYPYGYRC PFGLGGAEGE RVGLHYIENQ LGDPESGVLP
AAGMILETVQ GEGGVIAPSA DWLRGIRRIT REAGVPLILD EVQCGIGRTG KLFAFEHAGI
TPDVLVLSKA IGGSLPLAVV VYHKDLDRWQ PGAHAGTFRG NQMAMAAGAA TLRLIREERL
DQHAATMGER LCAHLQALQA GYPQIGEVRG RGLMLGVEMV DPQGRADAMG RAPHNRALAS
AVQQQCLRRG LILEVGGRHS SVLRLLPPLI ITAAQVDQVA DIFASALDAA VNH
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