| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2867 |
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| Symbol | |
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| ID | 5107782 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 3148820 |
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| End bp | 3151021 |
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| Gene Length | 2202 bp |
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| Protein Length | 733 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640504117 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_001188354 |
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| Protein GI | 146307889 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4773] Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0132982 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.0165927 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGAAAG CAGTGCAGGG TGCTGGACGT TTTCAACTGA AGTGCCTGGC CGTGGTGATT
GCTGCCACAT GCCACGGGAT GGTTCAGGCG CAAGAGGATC AGGTGACGCT GCCGTCGCAG
ACGGTCACCG GCGAGCTGGA CCGCCCGCAA GGCCCGGATT ACGGCTACAA GGCCGAGAAA
AGCCTGACCG CCAGCAAGAC CAGCACGCCG CTGTCGGAGA CGCCTCGTTC GGTGTCGGTG
GTGACCCGCA AACGCATCGA AGACCAGAAA TCGCAGAGCC TCACCGATGT GTTGGGCTAC
GTGCCGGGTA TCTTCGCGCC ACCCTTCGCT GCCGGTGATG GCCTGGCGGG TGACCTGTTC
TTCATCCGCG GTTTCAACGC CACCGACTAC GGCTACGGCC TGCTGCGCGA CGGTTTGCGC
GTGCAGGGCA ACCGCTACGA CACCACCAGC GAGCCCTATG GCCTGGAGCG GGTAGAAGTG
TTCCGCGGGC CGACCTCGAT TCTCTATGGG GAGAACGCGC CGGGCGGCCT GGTCAACCTG
GTCAGCAAAC GCCCGACCGC CGCCCCGCAG GGCGAAGTGC AGCTCAGCTA TGGCTCCAAC
GACCGTCGCC AGCTCAATCT GGATGTCTCC GGGCCGTTGA ATGACAGCGG CAATGTGCTG
GGGCGCGTGG TGATGGTGGG CCGCGAGGCC GATACCCAGG TCGATCACGT GCAGGACAAC
CGCATCTATA TCGCACCGTC GCTGACGCTG AATTTCGACG ATTACAACAG CCTGACTCTG
CTTGCCAACT ATCAGAAGGA TCGTACCAAG CTCCAACTGG GCTTACCGGC GGCCGGCACC
CTGCTGCCTA ATCCAAACGG CAAACTGGAC AAGGACACTC TGGTCGGCCA CCCGGACTGG
GACGACTTCG ATCGTGAGGT CTGGACCCTA GGCTACGAAT ACACGCATCA CTTCAACGAC
GACTGGCAGT TCCGTCAGAA CTCGCGCTAC ATGCAGTCGC GCATTCAGCG CAACGAGGTC
TGGCCGAGCA GTAGTCTGTC CAGCGCCAAC TACAGCAGCA CCGTTGGCTT GAATCTGGCA
CGTGATCGCT ACAACAAGTC CATGACCTAC TCGCTGGATA ATCAGCTGGA GGGCAAATTC
GCCACAGGTG CTCTGCAGCA CACCTTGCTG CTCGGCCTGG CCTTCGACCG TACTTCCTTC
AATCAGAATC AGGACGTCGG CATTATCTCG CAGATTGATT ACTACAACCC AGCCTGGGGG
GTAGTAGGTA AGCCGACCAC TCCAATTGCT CAGGGCAACA CTTTGCTTGA GCAGCAGATG
ACAGGGGTCT ACAGCCAGTT GCAGAGCAAA TATGAAAATT GGATTTTCCT GCTCGGTGGT
CGTTTCGACT CGGTCGACAA CCAGTACCGC AACAAGCTGG CACCGGCCAC TGATCTTGAT
TACAGCGATC ACAAGGGAAC TTGGCAGGGT GGGGTGATGT ACCAGTTCGA AAATGGTCTG
TCGCCCTATT TCAGTTACTC CACTGCTTTC GTACCGGTGC AGGAAACCTC CACCACTAGT
GGTCCCCTGG ATCCGATTAC CGCTGAGCAG TACGAGGTGG GTCTGAAGTA CGAGCCCAAG
GGCTGGAACA CCATGTTCAC TGCTGCCGTA TTCGATCTGC GTAAAGAAAA TGACGTCTAC
TTCGAAGCGG CCATCAATGA TTACCGTCAG GTCGGTGAGA GCCGTTCCAA AGGTGTCGAG
CTGGAAGTCA GCAGTGATAT CAGCGCCAAC CTGAATATCA CCGCTGCCTA CACCTACACC
GATGCACGTG TCACCAAGGA TGCGCCGGGT TCCCTGCTTG AGGGCAATCA GATGACCGGT
GTACCGCGTA ACCAGGCATC GGTCTGGGCC AACTACCGCT TCCTCGATGG CGCGTTACGC
GGTCTGCGTC TGGGTGGTGG TGTACGTCAC TTCGACAGTA CCTTCGCTTA CACCAACCCG
CCTGGCACCA ACCCGGCTGT CGTTTCCTAC GGCCGTCTGG ACACCGGCGA CGTAACCCTG
GTCGATGCCG CCATCGGCTA CGACATCGAC GAGAACTGGT CGGTCGACCT CAACGCCAAG
AACCTCTTCG ATCAGGAGTA CGTGGCAGGC TGCAACAACG CCGGGCGCTG TTACTGGGGC
GATGAGCGCA CCTTCCTCGG TACCGTGTCG CTGCGCTGGT AA
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| Protein sequence | MSKAVQGAGR FQLKCLAVVI AATCHGMVQA QEDQVTLPSQ TVTGELDRPQ GPDYGYKAEK
SLTASKTSTP LSETPRSVSV VTRKRIEDQK SQSLTDVLGY VPGIFAPPFA AGDGLAGDLF
FIRGFNATDY GYGLLRDGLR VQGNRYDTTS EPYGLERVEV FRGPTSILYG ENAPGGLVNL
VSKRPTAAPQ GEVQLSYGSN DRRQLNLDVS GPLNDSGNVL GRVVMVGREA DTQVDHVQDN
RIYIAPSLTL NFDDYNSLTL LANYQKDRTK LQLGLPAAGT LLPNPNGKLD KDTLVGHPDW
DDFDREVWTL GYEYTHHFND DWQFRQNSRY MQSRIQRNEV WPSSSLSSAN YSSTVGLNLA
RDRYNKSMTY SLDNQLEGKF ATGALQHTLL LGLAFDRTSF NQNQDVGIIS QIDYYNPAWG
VVGKPTTPIA QGNTLLEQQM TGVYSQLQSK YENWIFLLGG RFDSVDNQYR NKLAPATDLD
YSDHKGTWQG GVMYQFENGL SPYFSYSTAF VPVQETSTTS GPLDPITAEQ YEVGLKYEPK
GWNTMFTAAV FDLRKENDVY FEAAINDYRQ VGESRSKGVE LEVSSDISAN LNITAAYTYT
DARVTKDAPG SLLEGNQMTG VPRNQASVWA NYRFLDGALR GLRLGGGVRH FDSTFAYTNP
PGTNPAVVSY GRLDTGDVTL VDAAIGYDID ENWSVDLNAK NLFDQEYVAG CNNAGRCYWG
DERTFLGTVS LRW
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