Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_2852 |
Symbol | |
ID | 5107767 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | - |
Start bp | 3133995 |
End bp | 3134927 |
Gene Length | 933 bp |
Protein Length | 310 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640504102 |
Product | putative CheW protein |
Protein accession | YP_001188339 |
Protein GI | 146307874 |
COG category | [K] Transcription [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [COG0835] Chemotaxis signal transduction protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 0.141391 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCGGGT TGATGGATTC GGTTAACCAG CGCACCCAGC TGGTGGGACA GAACCGCTTG GAGTTGCTGC TATTTCGCCT GGAAGGCCCA CAGCTTTACG GCATCAACGT ATTCAAGGTG AAGGAGGTGC TGCAGTGCCC CAACCTCACC ATCATGCCGA AATCCAGTCC GGTGGTACGC GGCGTGGCCA ATATCCGTGG CGGCACCATT CCGATTCTCG ATCTGTCCAT CGCCACCGGG CGGGCGGCGC TGGAGGACCT CAAGACCAGC TTCGTCATCA TCACTGAGTA CAACACCAAG GTTCAGGGCT TTCTGGTGCG TTCCGTGGAG CGCATCGTCA ACATGAATTG GGAAGAGATC CATCCGCCAC CCAAGGGCAC CGGCCGTGAT CACTACCTGA CTGCGGTGAC GCGGCTCGAT CAGCAACTGG TCGAGATCAT CGACGTGGAG AAGATCCTTG CCGAGGTGGC GCCCACCTCC GAGGTGATCT CCGCCGGTGT GATCGACGAC CAGGTGCAGA GCCAGGCGGT GACCAAGCAT GTGCTGATCG TCGACGACTC GTCGGTGGCA CGTAAGCAGG TGTCGCGTTG TCTGCAGACT GTGGGGGTGG AAGTCACTGC ATTGAACGAC GGTCGTGAAG CGCTCAACTA CCTCAAGAAG ATGGCCGATG AAGGGCGCGA CCCCGACAAG GAACTGCTCA TGCTGATTTC CGACATCGAA ATGCCGGAAA TGGATGGCTA CACCCTGACT ACGGAGATTC GCAGCGATTC GCGCATGCAG AAGCTGCATA TCCTCCTGCA TACTTCGCTC TCGGGGGTAT TCAACCAGGC GATGGTGAAG AAGGTCGGTG CCGATGACTT TCTCGCCAAG TTCAAGCCGG ATGACTTGGC GGCGCGCGTG GTTGATCGCA TTCGTGTGGT GGATGGGGGC TGA
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Protein sequence | MAGLMDSVNQ RTQLVGQNRL ELLLFRLEGP QLYGINVFKV KEVLQCPNLT IMPKSSPVVR GVANIRGGTI PILDLSIATG RAALEDLKTS FVIITEYNTK VQGFLVRSVE RIVNMNWEEI HPPPKGTGRD HYLTAVTRLD QQLVEIIDVE KILAEVAPTS EVISAGVIDD QVQSQAVTKH VLIVDDSSVA RKQVSRCLQT VGVEVTALND GREALNYLKK MADEGRDPDK ELLMLISDIE MPEMDGYTLT TEIRSDSRMQ KLHILLHTSL SGVFNQAMVK KVGADDFLAK FKPDDLAARV VDRIRVVDGG
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