Gene Pmen_2850 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_2850 
SymbolflgB 
ID5107765 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp3132392 
End bp3132799 
Gene Length408 bp 
Protein Length135 aa 
Translation table11 
GC content61% 
IMG OID640504100 
Productflagellar basal body rod protein FlgB 
Protein accessionYP_001188337 
Protein GI146307872 
COG category[N] Cell motility 
COG ID[COG1815] Flagellar basal body protein 
TIGRFAM ID[TIGR01396] flagellar basal-body rod protein FlgB 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.115651 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCATCA ACTTCGGCAA GGCCCTAGGT ATCCACGAAC AGGCACTCGG CTTTCGTGCG 
CAGCGCGCCG AGGTGTTGGC CAACAACATC GCCAACGCCG ATACGCCCAA TTACAAGGCG
CGTGACCTGG ATTTCGCCAG CGTGCTGGCC GAGCAGAATG CCAAGCAGCA GCGCGGCAAC
GTCGCCCTGG CACGTACCGA TGGCCGCCAC ATTGCCGCCG AGGGCGTTGC CATGGGGCAG
GCCGAGCTGC CTTACCGCAC GCCGTTCCAC GCTTCGCTGG ATCAGAACAC GGTCGATCTG
CAGATCGAGC AAGCCAATTA CGCCGAAAAC TCGGTGCACT TCCAGGCGAG CTTCACCTTT
CTCAACAGCA AGTTCAAAGG GCTGACCAAC GCCCTGCGCG GCGAATAA
 
Protein sequence
MSINFGKALG IHEQALGFRA QRAEVLANNI ANADTPNYKA RDLDFASVLA EQNAKQQRGN 
VALARTDGRH IAAEGVAMGQ AELPYRTPFH ASLDQNTVDL QIEQANYAEN SVHFQASFTF
LNSKFKGLTN ALRGE