Gene Pmen_2846 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_2846 
SymbolflgF 
ID5107761 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp3128902 
End bp3129642 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content63% 
IMG OID640504096 
Productflagellar basal body rod protein FlgF 
Protein accessionYP_001188333 
Protein GI146307868 
COG category[N] Cell motility 
COG ID[COG4787] Flagellar basal body rod protein 
TIGRFAM ID[TIGR02490] flagellar basal-body rod protein FlgF
[TIGR03506] fagellar hook-basal body proteins 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.0922396 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACAAGA TGCTGTACGT CTCCATGACC GGAGCGCAGA ACAACACACT CGCTCTGCGT 
GCGCATGCCA ACAACCTGGC CAACGTTTCC ACCTCGGGCT TTCGCCGCGA CTTCGAGCAG
GCGCGTTCCA TGCCGCTGTT CGGCGAAAGC TATCCGGCAC GGGTATTTGC CATGAGCGAG
CGGCCGGGCA CCGATTTTCG TGCCGGTTCG CTGCAGGAAA CCGGTCGCGA TCTGGACGTT
GCCATCGGCG GCAAAGGTTG GATCGCCGTG CAGGCGCCCG ACGGCAGCGA AGCCTATGTG
CGTACCGCCA GCCTGAACAT CGATGCGCTC GGCGTGCTGC GCACCGGCAA TGGCTTGCCG
GTCATGGGCA ATGCCGGGCC GATTGCCGTG CCGCCGGAGC AGAAGGTGGA GATCGGTCAG
GACGGCACCA TCAGCATTCG CGCCCTGGGT GAGAACCCCA ACGTGCTGGC TGAGGTGGAC
CGCATCAAGC TGGTCAACCC GGATCCGAAG AGCCTGGAGA AGGGCACCGA CGGCCTGATC
CGGGTCAAGG GCCAGCCCGA GGTGGAGGCC GATGCCACGG TGCAGGTGAC TTCGGGCTTC
CTCGAGGCGA GCAACGTCAA CGCCGTGGAA GAAATGACCG CCATCCTTTC CCTGTCCCGC
CAGTTCGAGC TGTCGGTAAA GATGATGCGC ACCGCCGAAG ACAACGCCTC GGCCATGGCG
CGGGTTTTGC AAATTAGCTA A
 
Protein sequence
MDKMLYVSMT GAQNNTLALR AHANNLANVS TSGFRRDFEQ ARSMPLFGES YPARVFAMSE 
RPGTDFRAGS LQETGRDLDV AIGGKGWIAV QAPDGSEAYV RTASLNIDAL GVLRTGNGLP
VMGNAGPIAV PPEQKVEIGQ DGTISIRALG ENPNVLAEVD RIKLVNPDPK SLEKGTDGLI
RVKGQPEVEA DATVQVTSGF LEASNVNAVE EMTAILSLSR QFELSVKMMR TAEDNASAMA
RVLQIS