Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_2846 |
Symbol | flgF |
ID | 5107761 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | - |
Start bp | 3128902 |
End bp | 3129642 |
Gene Length | 741 bp |
Protein Length | 246 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640504096 |
Product | flagellar basal body rod protein FlgF |
Protein accession | YP_001188333 |
Protein GI | 146307868 |
COG category | [N] Cell motility |
COG ID | [COG4787] Flagellar basal body rod protein |
TIGRFAM ID | [TIGR02490] flagellar basal-body rod protein FlgF [TIGR03506] fagellar hook-basal body proteins |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.0922396 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACAAGA TGCTGTACGT CTCCATGACC GGAGCGCAGA ACAACACACT CGCTCTGCGT GCGCATGCCA ACAACCTGGC CAACGTTTCC ACCTCGGGCT TTCGCCGCGA CTTCGAGCAG GCGCGTTCCA TGCCGCTGTT CGGCGAAAGC TATCCGGCAC GGGTATTTGC CATGAGCGAG CGGCCGGGCA CCGATTTTCG TGCCGGTTCG CTGCAGGAAA CCGGTCGCGA TCTGGACGTT GCCATCGGCG GCAAAGGTTG GATCGCCGTG CAGGCGCCCG ACGGCAGCGA AGCCTATGTG CGTACCGCCA GCCTGAACAT CGATGCGCTC GGCGTGCTGC GCACCGGCAA TGGCTTGCCG GTCATGGGCA ATGCCGGGCC GATTGCCGTG CCGCCGGAGC AGAAGGTGGA GATCGGTCAG GACGGCACCA TCAGCATTCG CGCCCTGGGT GAGAACCCCA ACGTGCTGGC TGAGGTGGAC CGCATCAAGC TGGTCAACCC GGATCCGAAG AGCCTGGAGA AGGGCACCGA CGGCCTGATC CGGGTCAAGG GCCAGCCCGA GGTGGAGGCC GATGCCACGG TGCAGGTGAC TTCGGGCTTC CTCGAGGCGA GCAACGTCAA CGCCGTGGAA GAAATGACCG CCATCCTTTC CCTGTCCCGC CAGTTCGAGC TGTCGGTAAA GATGATGCGC ACCGCCGAAG ACAACGCCTC GGCCATGGCG CGGGTTTTGC AAATTAGCTA A
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Protein sequence | MDKMLYVSMT GAQNNTLALR AHANNLANVS TSGFRRDFEQ ARSMPLFGES YPARVFAMSE RPGTDFRAGS LQETGRDLDV AIGGKGWIAV QAPDGSEAYV RTASLNIDAL GVLRTGNGLP VMGNAGPIAV PPEQKVEIGQ DGTISIRALG ENPNVLAEVD RIKLVNPDPK SLEKGTDGLI RVKGQPEVEA DATVQVTSGF LEASNVNAVE EMTAILSLSR QFELSVKMMR TAEDNASAMA RVLQIS
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