Gene Pmen_2843 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_2843 
SymbolflgI 
ID5107758 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp3125965 
End bp3127125 
Gene Length1161 bp 
Protein Length386 aa 
Translation table11 
GC content67% 
IMG OID640504093 
Productflagellar basal body P-ring protein 
Protein accessionYP_001188330 
Protein GI146307865 
COG category[N] Cell motility 
COG ID[COG1706] Flagellar basal-body P-ring protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.251575 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.108847 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCCTGCC GCCGGCAGTT CGCCGCCGCT CATCGCGGCT ATCGTCGGCG TGGCGCCAAC 
GACTGGCTGC TGCTGGCCAC CATGCTGGCG TGCCTGCTGC TCAGCCTGCC GACCCAGGCC
GAGCGCCTCA AGGACCTGGC CTCGATCCAG GGCGTGCGCA GCAACCAACT GATCGGTTAC
GGCCTGGTCG TCGGCCTCAA CGGCAGTGGC GACCAGACCA CGCAGACGCC ATTCACCGTG
CAGACCTTCA ACAACATGCT GGCGCAGTTC GGCATCAAGG TGCCGCCGGG TGGCAACGTG
CAGCTGAAGA ACGTCGCCGC GGTATCGGTG CATGCCGAGC TGCCGGCGTT CGCCAAGCCC
GGGCAGACCA TCGACATCAC CATTTCCTCC ATCGGCAACG CCAAGAGCCT GCGCGGCGGC
AGCCTGCTGA TGACGCCGCT CAAGGGCATC GACGGCAACG TCTACGCCAT CGCCCAGGGC
AACCTGGTGG TCGGTGGTTT CGACGCCAGT GGTGCCGACG GCTCGCGCAT CACCGTCAAC
GTGCCATCCG CCGGGCGCAT TCCTGGCGGG GCCACTGTCG AACGTCCGGT GCCGAGCGGC
TTCGATCAGG GCAACTACCT GACGCTCAAC CTCAACCGTC CCGACTTCAC CACGGCAAAG
AACATCGTCG ATCAGATCAA CGATCTGCTC GGCCCGGGTG TGGCCCAGGC CATCGACGGC
GGCTCGATTC GCGTCAGCGC GCCGCTCGAT CCGAATCAGC GCGTCGACTA CCTGTCGATC
CTGGAAAACC TCGAGGTGCA GGCCGGTCAG GCGGTGGCCA AGGTCATCAT CAACTCGCGC
ACCGGCACCA TCGTCATCGG CCAGAACGTG CGCGTGCAGC CGGCAGCCGT GACCCATGGC
AGCCTGACCG TGACCATCAC CGAAGACCCC ATCGTCAGCC AGCCCGAGGC ATTCTCCGGC
GGGCAGACCG CGGTGGTGCC GCGCTCGCGC GTCGGCGCCG AGGAAGAAAC CAAGCCGATG
TTCAAGTTCG GCCCCGGTAC CAGCCTGGAC GAGATCGTCC GTGCGGTTAA CCAGGTGGGC
GCCGCGCCTT CCGACCTGAT GGCCATCCTG GAGGCGCTCA AGCAAGCCGG CGCCCTGCAG
GCTGACCTCA TCGTGATCTG A
 
Protein sequence
MSCRRQFAAA HRGYRRRGAN DWLLLATMLA CLLLSLPTQA ERLKDLASIQ GVRSNQLIGY 
GLVVGLNGSG DQTTQTPFTV QTFNNMLAQF GIKVPPGGNV QLKNVAAVSV HAELPAFAKP
GQTIDITISS IGNAKSLRGG SLLMTPLKGI DGNVYAIAQG NLVVGGFDAS GADGSRITVN
VPSAGRIPGG ATVERPVPSG FDQGNYLTLN LNRPDFTTAK NIVDQINDLL GPGVAQAIDG
GSIRVSAPLD PNQRVDYLSI LENLEVQAGQ AVAKVIINSR TGTIVIGQNV RVQPAAVTHG
SLTVTITEDP IVSQPEAFSG GQTAVVPRSR VGAEEETKPM FKFGPGTSLD EIVRAVNQVG
AAPSDLMAIL EALKQAGALQ ADLIVI