Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_2837 |
Symbol | |
ID | 5107752 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | - |
Start bp | 3118803 |
End bp | 3119465 |
Gene Length | 663 bp |
Protein Length | 220 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 640504087 |
Product | nucleotidyl transferase |
Protein accession | YP_001188324 |
Protein GI | 146307859 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1213] Predicted sugar nucleotidyltransferases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.0282356 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 0.117434 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGCCTC TTAAGCACGT TGTGATCAGT GCGGCCGGCA TCGGCTCGCG TTTGGGGCTG AACAAGCCCA AGTGTCTGGT GGAGGTGGCC GGGCGCTCGT TGCTCGATTG GCATCTGGAG CGCCTGCAAT GGGCGGAAAC CGTTTGGCTG GTAGTCGGTT TCCATGAGGA GGAAGTGATC GAGCACGCCA TCGCCATACG TCCGGATTTG ATCATCGTGC GCAATCCCGA TTACGCCCGG ACCAACACGC TACAGAGCAT TTACCGGGTT TCACGTCACT TGGGTGAGCG TTTACTGGTT CTGGATGCGG ACACCGTCGT GGAACCGCAA AGTTTCAGCG CTTTTCTTCA GGCCTGTGAA TGCCACGAGC AATTGATTGG CGTGTCTCCC TATATCACCA GTGATGGCGT AAGGGTCCTG TTGGACGGAG AGGGGAGCCA GGTGAGCGGT TTTACCCGTG AGCCTCGTTC AGCAATGGAG TGGACCGGAA TAGCCGTGAT TCGTCCGGAG CTCGTGCGGA ACGAGCCGAT CTATGTCTAC CAGGCGATCG AAGCGCACCT GCCTTTGCCC GCATTCGAGC TCAAGGCTTT TGATATCGAT ACCACGGCGG ATCTCGATAT GGCGCGCAAT GTACTGGCCA CCCAGTGGGG ACAACATGAG TAA
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Protein sequence | MSPLKHVVIS AAGIGSRLGL NKPKCLVEVA GRSLLDWHLE RLQWAETVWL VVGFHEEEVI EHAIAIRPDL IIVRNPDYAR TNTLQSIYRV SRHLGERLLV LDADTVVEPQ SFSAFLQACE CHEQLIGVSP YITSDGVRVL LDGEGSQVSG FTREPRSAME WTGIAVIRPE LVRNEPIYVY QAIEAHLPLP AFELKAFDID TTADLDMARN VLATQWGQHE
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