| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2828 |
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| Symbol | |
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| ID | 5107743 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 3105512 |
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| End bp | 3106741 |
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| Gene Length | 1230 bp |
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| Protein Length | 409 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640504078 |
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| Product | PAS/PAC sensor signal transduction histidine kinase |
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| Protein accession | YP_001188315 |
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| Protein GI | 146307850 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5000] Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.453157 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.0182492 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCGAGAGA AGCAGATGGA AGCCAACCTT CGTCCCACCG AGCCAGTCGA GGCAAACCCC
TCGGCACCGC TCGAACAAGC CAGCCGTGCG GGCCTGGAGC AGGCGTTTGC CCTGTTCAAC
CAGATGTCCA ACCAGCTCAG CGAGTCCTAC AGCCTGCTCG AGGCGCGGGT CACCGAGCTG
AAAGGCCAGC TGGCGCTGGT CAGCGCTCAG CGCATGCAGG AGCTGGCAGA GAAGGAGCGT
CTGGCTCATC GCCTGCAAAG CCTGCTGGAT CTGCTGCCCG GCGGGGTGAT CGTCATCGAT
GGCCAGGGCG TGGTGCGCGA AGCCAATCCC GTGGCGCGCG CGCTGCTGGG GCAGCCTCTG
GTCGGCATGC TCTGGCGCCA GGTGATCGCC CGCAACTTCG CCCCGCGCGA AGACGATGGT
CATGAAATCT CCATGCGCGA CGGGCGTCGC CTGTCCATTG CCACTCGCTC GCTGCATGGC
GAGCCGGGGC AGCTGGTGCT TTTGACCGAC CTGACGGAAA CCCGCCGCCT GCAGGATCAA
CTGTCCCGCC ATGAGCGTCT TTCGGCGCTG GGGCGCATGG TCGCCTCGCT GGCCCATCAG
ATCCGTACGC CGCTCTCTGC GGCGCTGCTG TATGCCAGCC ATCTCAATGA GCAGGTGCTG
CCGGCCGAGC AGCAGCAGCG TTTCGCCGGG CGGCTCAAGG AGCGTCTGCA CGAGCTGGAG
AATCAGGTGC GCGACATGCT GATCTTTGCC CGCGGCGAGC TGCCGCTGCC TGATCGGCTG
TCGCCTGCGG CCCTGTTCGA TGCCTTGCGC GCGGCAGCGG AGGTGCATGT CGGCGGCATG
GCGGTGCGCT GGCAGTGCGA TGTGCGCGAG GGCGAATTGC TGTGCAACCG CGACACGCTG
GTAGGCACCG TGCTCAATCT CATCGATAAC GCCATTCAGG CAGGAGGGCG CGAAGCGCGG
CTGAAGGTCC ACCTGTATCG CCGCGATAAC CAGGTGCGCC TGTGTGTCAG CGACAACGGC
CCCGGCATGA GCCGCGAAAC GCTGGCGCGC CTGGGAGAGC CATTCTTCAC CACCAAGACC
ACCGGAACCG GCCTCGGCCT GGCGGTGGTC AAGGCCGTGG CGCGGGCCCA CCAGGGCCAG
TTGCTGCTGC AATCGCGCGC AGGTCGCGGA ACCTGCGCCA TCGTTTCTCT GCCGCTGCTC
GAGGCGGCGC TTCACTCGAA TCAGGAGTAA
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| Protein sequence | MREKQMEANL RPTEPVEANP SAPLEQASRA GLEQAFALFN QMSNQLSESY SLLEARVTEL
KGQLALVSAQ RMQELAEKER LAHRLQSLLD LLPGGVIVID GQGVVREANP VARALLGQPL
VGMLWRQVIA RNFAPREDDG HEISMRDGRR LSIATRSLHG EPGQLVLLTD LTETRRLQDQ
LSRHERLSAL GRMVASLAHQ IRTPLSAALL YASHLNEQVL PAEQQQRFAG RLKERLHELE
NQVRDMLIFA RGELPLPDRL SPAALFDALR AAAEVHVGGM AVRWQCDVRE GELLCNRDTL
VGTVLNLIDN AIQAGGREAR LKVHLYRRDN QVRLCVSDNG PGMSRETLAR LGEPFFTTKT
TGTGLGLAVV KAVARAHQGQ LLLQSRAGRG TCAIVSLPLL EAALHSNQE
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