Gene Pmen_2816 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_2816 
SymbolfliL 
ID5107612 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp3093377 
End bp3093898 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content62% 
IMG OID640504066 
Productflagellar basal body-associated protein FliL 
Protein accessionYP_001188303 
Protein GI146307838 
COG category[N] Cell motility 
COG ID[COG1580] Flagellar basal body-associated protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.0470696 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTAAGA AAGAAGCGGC ACCGGCCGCC GACGGACAAC CCGGCGGCAA GAGCAAGCTC 
AAGCTCATCA TTCTCATCGT CGTGGGTCTG CTCCTGGCCG TCGGTCTTTC CATTGGCGGT
ACCTGGTTCA TTCTCAGCAA GGGCGACAAG GCCGACGATG CCAAGCCCGC CGAAGCTGCC
AGCCCCGCGG TGCCGGTGCG CCAACCGGCG CTGTATCAGG ATCTGATGCC GGCTTTCGTG
GTCAATTTCA ATCATCAGGG CCGCACTCGC TATCTGCAGG TCAGCATGGC GCTGATGAGC
CGCGACGCCG CCGGCGTGGA GAAACTCAAG GTGCACATGC CGGTTTTGCG CAATCGCCTG
GTGATGCTGC TTTCCGGTCA GGATTTCGCT GCCCTGCAGA CCCCGCTGGG CAAGGAGATG
CTCCTGCAGC AGGCCTTGGC CAGCGTGCAG GAACTGGCCC AGAAGGAAAC CGGCAGCACC
GTGGTCGAGC AGGTGCTGTT CACCAATTTC GTTTTGCAGT AG
 
Protein sequence
MAKKEAAPAA DGQPGGKSKL KLIILIVVGL LLAVGLSIGG TWFILSKGDK ADDAKPAEAA 
SPAVPVRQPA LYQDLMPAFV VNFNHQGRTR YLQVSMALMS RDAAGVEKLK VHMPVLRNRL
VMLLSGQDFA ALQTPLGKEM LLQQALASVQ ELAQKETGST VVEQVLFTNF VLQ