| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2815 |
|---|
| Symbol | fliM |
|---|
| ID | 5107611 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas mendocina ymp |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009439 |
|---|
| Strand | - |
|---|
| Start bp | 3092392 |
|---|
| End bp | 3093363 |
|---|
| Gene Length | 972 bp |
|---|
| Protein Length | 323 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640504065 |
|---|
| Product | flagellar motor switch protein FliM |
|---|
| Protein accession | YP_001188302 |
|---|
| Protein GI | 146307837 |
|---|
| COG category | [N] Cell motility |
|---|
| COG ID | [COG1868] Flagellar motor switch protein |
|---|
| TIGRFAM ID | [TIGR01397] flagellar motor switch protein FliM |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 0.0529041 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGTGC AAGACCTGCT TTCCCAGGAT GAGATCGACG CGCTGCTGCA TGGCGTCGAC
GACGGGCTGG TCGCCACCGA AGACGCCGCG GAACCTGGAA GCGTCAAGCA ATATGACCTG
ACCAGCCAGG ACCGCATCGT CCGTGGGCGC ATGCCGACCC TGGAGATGAT CAACGAGCGT
TTCGCCCGCT ATACCCGCAT CAGCATGTTC AACCTGCTGC GCCGCTCGGC GGACGTGGCC
GTCGGTGGCG TGCAGGTGAT GAAGTTCGGC GAGTACGTGC ACTCGCTGTA CGTGCCCACC
AGCCTCAACC TGGTGAAGAT GAAGCCGCTG CGCGGCACCG GCCTGTTCAT TCTGGATGCC
AAGCTGGTGT TCAAGCTGGT GGACAACTTC TTCGGCGGCG ACGGCCGCCA CGCCAAGATC
GAGGGGCGCG AGTTCACCCC CACCGAACTT CGCGTGGTGC GCATGGTGCT CGATCAGGCC
TTCGTCGACC TGCGCGAGGC CTGGCACGCG GTGATGGATA TCAACTTCGA GTACGTCAAC
TCCGAGGTCA ACCCGGCGCT GGCCAATATC GTCAGCCCCA GCGAGGTGGT GGTGGTGTCC
ACCTTCCATA TCGAGCTGGA CGGCGGCGGC GGCGACCTGC ACATCACCAT GCCCTATTCG
ATGATCGAGC CGATTCGCGA GATGCTCGAC GCCGGTTTCC AGTCCGACGT CGACGATCAG
GACGAGCGCT GGATCAAGGC CCTGCGCGAG GACATCCTCG ACGTCAGCGT GCCGCTGGCC
GCCACCGTGG CGCGGCGTCA GCTGAAGCTG CGCGACATCC TGCACATGCA GCCGGGTGAC
GTGATCCCCG TGGAGCTGCC GGAAAACGTG ATCATGCGCG CCAATGGCGT GCCGACTTTC
AAGGTCAAGC TCGGCGCACA CAAGGGCAAT CTCGCCCTGC AGGTGCTCGA GCCGATCGAG
CGTCAGCGCT GA
|
|---|
| Protein sequence | MAVQDLLSQD EIDALLHGVD DGLVATEDAA EPGSVKQYDL TSQDRIVRGR MPTLEMINER
FARYTRISMF NLLRRSADVA VGGVQVMKFG EYVHSLYVPT SLNLVKMKPL RGTGLFILDA
KLVFKLVDNF FGGDGRHAKI EGREFTPTEL RVVRMVLDQA FVDLREAWHA VMDINFEYVN
SEVNPALANI VSPSEVVVVS TFHIELDGGG GDLHITMPYS MIEPIREMLD AGFQSDVDDQ
DERWIKALRE DILDVSVPLA ATVARRQLKL RDILHMQPGD VIPVELPENV IMRANGVPTF
KVKLGAHKGN LALQVLEPIE RQR
|
|---|
| |