| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2804 |
|---|
| Symbol | |
|---|
| ID | 5107600 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas mendocina ymp |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009439 |
|---|
| Strand | - |
|---|
| Start bp | 3082776 |
|---|
| End bp | 3083195 |
|---|
| Gene Length | 420 bp |
|---|
| Protein Length | 139 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 640504054 |
|---|
| Product | response regulator receiver protein |
|---|
| Protein accession | YP_001188291 |
|---|
| Protein GI | 146307826 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.202418 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 0.168942 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCAATGCG TTTGGGACTG TACGGAGGTC GACTTGGACA AGAACATGAA AATCCTCATC
GTTGACGATT TCTCGACGAT GCGACGGATC ATCAAGAACC TCTTGCGGGA CTTGGGCTTC
ACCAACACCG CCGAGGCCGA CGATGGCACC TCGGCACTGC CCATGCTGCA GAGCGGCAGC
TTCGACTTTC TGGTGACCGA CTGGAACATG CCCGGCATGA CCGGCATCGA CCTGCTGCGC
GCGGTGCGCG CCGACGAGCG CCTCAAGCAC CTGCCGGTGT TGATGGTTAC CGCCGAAGCC
AAACGTGACC AGATCATCGA AGCGGCACAG GCCGGCGTGA ACGGCTATGT GGTCAAGCCC
TTCACCGCCC AGGTGCTGAA GGAAAAGATC GAGAAGATCT TCGAGCGGGT AAACGGCTGA
|
|---|
| Protein sequence | MQCVWDCTEV DLDKNMKILI VDDFSTMRRI IKNLLRDLGF TNTAEADDGT SALPMLQSGS
FDFLVTDWNM PGMTGIDLLR AVRADERLKH LPVLMVTAEA KRDQIIEAAQ AGVNGYVVKP
FTAQVLKEKI EKIFERVNG
|
|---|
| |