Gene Pmen_2803 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_2803 
Symbol 
ID5107599 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp3081968 
End bp3082756 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content61% 
IMG OID640504053 
Productchemotaxis phosphatase, CheZ 
Protein accessionYP_001188290 
Protein GI146307825 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG3143] Chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.402968 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.192895 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACACG ATGACTCCAC GCTGGGTGAC CTCGAGTCGA CCCTGAAAAG CAACGCCCGC 
GAGCTGGTCG ATAGCCTGGA ACAAGGCAAC TTCGGCGCTG CGGTGCAACT GATAAACGAG
CTCAACAAGG TCCGCGATCG CGGCCTGTAC CACGAGGTCG GCAAGCTGAC CCGGGAGCTG
CACAACGCCA TCGTCAATTT CCAGCTCGAC CCGCGCATGC CGCATGCCCA GGAGCTGTCG
CAGATCGCCG ATGCCACCGA GCGCCTGAAC TATGTCGTGA CCATGACCGA GAAGGCCGCC
AACCGCACCA TGGATCTGGT GGAGCAGAGC GCGCCGCTGG TCAACGACCT GAGCGACGAG
GCGCAGAGCC TGAGCGCGGA GTGGGGCCGT TTCATGCGCC GCGAGATGGG CGCCGAGGGC
TTTCGCGAGC TGGCCAAGCG TATCGAGTTG TTTCTCGCTC GCAGCGAGCG AGACAGCAAC
AAGCTGTCCG CTCATCTCAA CGACATCTTG CTGGCGCAGG ACTATCAGGA CCTGACCGGC
CAGGTGATCA AGCGCGTCAC CCAGTTGGTG ACCGAGGTGG AAAGCAACCT GCTCAAGCTG
GTGCTCATGG CCAGTCAGGT CGACCGTTTT GCCGGTATTC AGCACGACCA TGAAGTGCTG
CGCGCCGAAC AGGAAAAATT AAAAGAGCCA TCCCGGGGTG AAGGTCCGCA GATTCATGCC
GATAAGCGTG ATGACGTCGC CTCCAGTCAG GACGATGTCG ACGACCTGCT GTCCAGTCTT
GGATTCTAA
 
Protein sequence
MEHDDSTLGD LESTLKSNAR ELVDSLEQGN FGAAVQLINE LNKVRDRGLY HEVGKLTREL 
HNAIVNFQLD PRMPHAQELS QIADATERLN YVVTMTEKAA NRTMDLVEQS APLVNDLSDE
AQSLSAEWGR FMRREMGAEG FRELAKRIEL FLARSERDSN KLSAHLNDIL LAQDYQDLTG
QVIKRVTQLV TEVESNLLKL VLMASQVDRF AGIQHDHEVL RAEQEKLKEP SRGEGPQIHA
DKRDDVASSQ DDVDDLLSSL GF