Gene Pmen_2796 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_2796 
Symbol 
ID5107592 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp3074653 
End bp3075132 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content59% 
IMG OID640504046 
Productputative CheW protein 
Protein accessionYP_001188283 
Protein GI146307818 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0835] Chemotaxis signal transduction protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.153028 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.193406 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAAAA GCTCTGCACA AGGTGCCGAA GATCCGATTC TGCAGTGGGT GACCTTTCGC 
CTGGATAACG AAACCTACGG CATCAACGTG ATGCAGGTGC AGGAAGTCCT GCGCTACACC
GAGATCGCTC CGGTACCGGG TGCGCCAAGC TACGTGCTGG GCATCATCAA CCTGCGCGGC
AACGTGGTCA CCGTGATTGA TACCCGCCAG CGCTTCGGCC TGGGCTCGGC GCCGGTCACC
GACAATACCC GTATCGTCAT CATCGAAGCG GACAAGCAGG TGGTCGGCAT TCTCGTCGAC
AGCGTCGCCG AAGTGGTTTA CCTGCGTCAG TCCGAGATCG AGACCGCGCC CAACGTCGGC
AACGACGAAT CGGCCAAGTT CATCCAGGGC GTATGCAACA AGAACGGCGA GCTGCTGATC
CTGGTCGAGC TGGACAAGAT GATGAGCGAG GAGGAGTGGT CGGAGCTGGA GAGCATCTGA
 
Protein sequence
MKKSSAQGAE DPILQWVTFR LDNETYGINV MQVQEVLRYT EIAPVPGAPS YVLGIINLRG 
NVVTVIDTRQ RFGLGSAPVT DNTRIVIIEA DKQVVGILVD SVAEVVYLRQ SEIETAPNVG
NDESAKFIQG VCNKNGELLI LVELDKMMSE EEWSELESI