| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2791 |
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| Symbol | |
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| ID | 5107587 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 3070951 |
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| End bp | 3071595 |
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| Gene Length | 645 bp |
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| Protein Length | 214 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640504041 |
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| Product | cytochrome c biogenesis protein CcmA |
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| Protein accession | YP_001188278 |
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| Protein GI | 146307813 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG4133] ABC-type transport system involved in cytochrome c biogenesis, ATPase component |
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| TIGRFAM ID | [TIGR01189] heme ABC exporter, ATP-binding protein CcmA |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.324914 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 0.539608 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACCCTTC CCGTTCCTCT TCTCGAAGCC GTGGCGCTCA GTTGTGAGCG GGACTGGCGC
ATGCTTTTCG AGCATCTGAA TCTGGCCATG CAGGCCGGCG ACATGCTGCA GGTCAGCGGG
CCCAACGGCA GTGGCAAGAC CAGCCTGCTG CGTCTGCTTG CCGGCCTGCG CCAGCCCACC
GCCGGCAGCA TCCGCCTCAA CGGCCAGCCG ATGAGCGAGC AGCGCGCGGA GCTTGCACGC
AATCTGCTAT GGATCGGCCA CGCCGCCGGC ATCAAGGGGC TGCTGACTGC CGAGGAGAAC
CTCGCCTGGC TCTGCGCCCT GCATCGTCCG GCCAGCCGCG AGGCGATCTG GCAGGCCCTG
GAAGCGGTCG GGCTGCGCGG TTTCGAGGAC GTTCCCTGTC ACACCCTGTC CGCCGGTCAG
CAGCGCCGGG TGGCCCTGGC GCGCCTGTAT CTGGTCGATA CGCCGCCGCT GTGGGTTCTG
GACGAGCCCT TCACCGCCCT GGACAAGCAG GGCGTGGCGC AGCTCGAGGC GCATCTGGCC
AGTCATTGCG AGCGCGGTGG CGTGGTGATA CTGACCACCC ATCACAGCCT GCAGCACAAG
CCGGCCACCT ACCGCGATCT GGATCTGGGG CAGTACGCCG CATGA
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| Protein sequence | MTLPVPLLEA VALSCERDWR MLFEHLNLAM QAGDMLQVSG PNGSGKTSLL RLLAGLRQPT
AGSIRLNGQP MSEQRAELAR NLLWIGHAAG IKGLLTAEEN LAWLCALHRP ASREAIWQAL
EAVGLRGFED VPCHTLSAGQ QRRVALARLY LVDTPPLWVL DEPFTALDKQ GVAQLEAHLA
SHCERGGVVI LTTHHSLQHK PATYRDLDLG QYAA
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