| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2790 |
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| Symbol | |
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| ID | 5107586 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 3070283 |
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| End bp | 3070954 |
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| Gene Length | 672 bp |
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| Protein Length | 223 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640504040 |
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| Product | heme exporter protein CcmB |
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| Protein accession | YP_001188277 |
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| Protein GI | 146307812 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG2386] ABC-type transport system involved in cytochrome c biogenesis, permease component |
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| TIGRFAM ID | [TIGR01190] heme exporter protein CcmB |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.18046 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 0.555679 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAACG TATTCACCCA GCTTCTGGCC CGCGAGATGC GCCTGCTGGC CCGCCGTCCG
TCCGACCTGG CCAACCCCCT GGTGTTCTTC GCCATCGTCA TCGCGCTGTT CCCGCTGGCG
GTGGGGCCGG AGACGCAATT GTTGCAAACC CTTTCTCCCG GCCTGGTCTG GGTGGCGGCG
CTTCTGGCCG TGCTGCTCTC GCTGGACGGG CTTTTCCGCA GTGATTTCGA GGATGGCTCG
CTGGAACAGT GGGTCCTTTC GTCGCACCCC CTGCCTCTTC TGGTGTTGGC CAAGGTGCTG
GCACACTGGC TGTTCAGCGG CCTGGCGCTG GTATTGCTGG CGCCCTTGCT GGCGCTGATG
CTCGGTCTGC CCGGGCGCTG TCTGCCGGTT CTGCTGATTT CCCTGCTGCT CGGCACTCCG
GTGCTGAGTC TGCTAGGCGC GGTGGGCGCT GCGCTCACCG TTGGCCTCAA GCGCGGCGGC
CTGCTGCTGG CGCTGCTGAT TCTGCCGCTG TACATCCCGG TGCTGATTCT TGGCAGCGGG
GCGTTGCAGG CGGCCCTGCA AGGATTGCCG GCGACCGGTC ACCTGTTGTG GCTGGCCAGC
CTCACCGCCC TGGCGGTGAC CCTGACACCT TTTGCAATTG CCGCCGGCCT GACCATCAGC
GTCGGCGAAT AA
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| Protein sequence | MSNVFTQLLA REMRLLARRP SDLANPLVFF AIVIALFPLA VGPETQLLQT LSPGLVWVAA
LLAVLLSLDG LFRSDFEDGS LEQWVLSSHP LPLLVLAKVL AHWLFSGLAL VLLAPLLALM
LGLPGRCLPV LLISLLLGTP VLSLLGAVGA ALTVGLKRGG LLLALLILPL YIPVLILGSG
ALQAALQGLP ATGHLLWLAS LTALAVTLTP FAIAAGLTIS VGE
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