| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2785 |
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| Symbol | |
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| ID | 5107581 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 3066279 |
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| End bp | 3066818 |
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| Gene Length | 540 bp |
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| Protein Length | 179 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640504035 |
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| Product | periplasmic protein thiol--disulphide oxidoreductase DsbE |
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| Protein accession | YP_001188272 |
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| Protein GI | 146307807 |
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| COG category | [C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0526] Thiol-disulfide isomerase and thioredoxins |
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| TIGRFAM ID | [TIGR00385] periplasmic protein thiol:disulfide oxidoreductases, DsbE subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGACGTC TGCTGTTGCT GTTGCCGTTG CTGGCATTTC TCGGCATCGC CGTGTTCCTC
TACCGCGGCC TGTTCCTCGA CCCGTCGGAA CTACCGTCGG CGTTGATCGG CAAGCCGTTC
CCGGCCTTCA GCCTACCCTC GCTGGACGAT CCCGAGCGCA CCCTCAGCGA GGCCGACATC
AAGGGCCGGC CCGCGCTGGT CAACGTCTGG GCCACCTGGT GCCCGGCCTG CCGCCACGAG
CACCCGGTGC TGAACAAGCT GGCCGAGGCC GGGGTGGTGA TCCATGGCGT GAACTACAAG
GACGAGCGGG AGCCGGCGCA GAAATGGCTG CGCGACCTGC ACAACCCCTA CCAGCTCAAT
ATCGAGGACG CCAAGGGCAG CCTAGGCCTG GACCTGGGCG TCTACGGCGC GCCGGAAACC
TTCTTCGTCG ATGCCCAGGG CATCATCCGG CACAAGTTCG TCGGCACCAT CGACGAGCGC
GTCTGGCGCG AGAAGCTGGC GCCGATCTAT CAGCAACTGG TCGACGAGGC CCAGCCATGA
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| Protein sequence | MRRLLLLLPL LAFLGIAVFL YRGLFLDPSE LPSALIGKPF PAFSLPSLDD PERTLSEADI
KGRPALVNVW ATWCPACRHE HPVLNKLAEA GVVIHGVNYK DEREPAQKWL RDLHNPYQLN
IEDAKGSLGL DLGVYGAPET FFVDAQGIIR HKFVGTIDER VWREKLAPIY QQLVDEAQP
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