| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2770 |
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| Symbol | |
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| ID | 5107566 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 3047983 |
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| End bp | 3048780 |
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| Gene Length | 798 bp |
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| Protein Length | 265 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640504020 |
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| Product | hydroxypyruvate isomerase |
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| Protein accession | YP_001188257 |
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| Protein GI | 146307792 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3622] Hydroxypyruvate isomerase |
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| TIGRFAM ID | [TIGR03234] hydroxypyruvate isomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.0252433 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 0.732675 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCCGTT TTGCTGCCAA CCTGTCCATG CTGTTCACCG AAGTGGACTT CCTGGACCGT
TTCGCCGCCG CCGCCGAAGC CGGTTTCAGC GGCGTGGAAT ACCTCTTCCC CTATGACTTC
GCGGTGGAAG AGATCAAGGC CCGTCTGGAC GCCAACAAGC TCGAGCAGGT GCTGTTCAAC
CTGCCGGCCG GCGACTGGGG CAAGGGCGAG CGCGGCATCG CCTGCCATCC GGATCGCGTC
GAGGAATTCC GCGCCGGCGT CGACAAGGCC ATCGCCTACG CCAAGGTGCT GGGCAACACA
CAGATCAACT GCCTGGCCGG CATCCGTCCG CAGGGCGTGG ATTGCGCGAC CGTCGAGAAG
ACCTTCGTCG ACAACCTGCG CTATGCCGCC GACAAGCTGG CCGGCGCCGG TATCCGCCTG
GTAATGGAAG CCATCAACAC CCGCGACATC CCCGGCTTCT ACCTCAGCAC CACCCAACAG
GCCCTGGACA TCCGCAACAA GGTCGGCAGC ACCAACCTGT ACCTGCAGTA CGACATCTAC
CACATGCAGA TCATGGAAGG TGACCTGGCC CGTACCGTGG AAAGCAACCT GGCCGCCATC
AACCACGTGC AGCTGGCCGA CAACCCGGGC CGCAACGAGC CGGGCACCGG CGAGATCAAC
TACCGCTTCC TCTTCGAGCA CCTGGATCGC ATCGGCTACC AGGGCTGGAT CGGCTGTGAA
TACAAGCCGG CAACCACCAC CGCTGCCGGC CTCGGCTGGA TGGCTTCCCA CCAGAACAGC
ATGCACAACG CAATCTGA
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| Protein sequence | MPRFAANLSM LFTEVDFLDR FAAAAEAGFS GVEYLFPYDF AVEEIKARLD ANKLEQVLFN
LPAGDWGKGE RGIACHPDRV EEFRAGVDKA IAYAKVLGNT QINCLAGIRP QGVDCATVEK
TFVDNLRYAA DKLAGAGIRL VMEAINTRDI PGFYLSTTQQ ALDIRNKVGS TNLYLQYDIY
HMQIMEGDLA RTVESNLAAI NHVQLADNPG RNEPGTGEIN YRFLFEHLDR IGYQGWIGCE
YKPATTTAAG LGWMASHQNS MHNAI
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