| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2764 |
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| Symbol | |
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| ID | 5107560 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 3040321 |
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| End bp | 3041874 |
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| Gene Length | 1554 bp |
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| Protein Length | 517 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640504014 |
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| Product | permease for cytosine/purine, uracil, thiamine, allantoin |
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| Protein accession | YP_001188251 |
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| Protein GI | 146307786 |
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| COG category | [F] Nucleotide transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG1953] Cytosine/uracil/thiamine/allantoin permeases |
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| TIGRFAM ID | [TIGR00800] NCS1 nucleoside transporter family |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 0.63902 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACGAA TACAAAATCG GAACGAAACC TGCAGACAAA CCTCCTCATA CGCCGTCGCG
GCGCAAGAAC AAAACTGGGA GCTGTCCATG TCCAACGCCG AAGATTTCCG CATCAAGCAC
ATCGATACCT CGCTGCACAA CGAGGATCTC GCCCCCCTGG CTCCCGAGAA ACGTACCTGG
GGCTGGTTCG AGATCTTCAA CGTCTGGTCG AACGACATTC AGAGTCTGTT CGGCTATACC
CTGGCGGCGA CGCTGTTCAT CTCCTACGGG CTCAATGGCT GGGCGGTGCT GGCCGGCATC
GTCCTCGCCG GCTTCATCGT CATGGGCCTG GTACAGCTGA CCGGCAAACC CAGCGTCAAG
TACGGCATTC CCTTCCCGGT GTTCGCCCGC GCCAGCATGG GTGTGCGCGG CGCCAACTTC
CCCGCCCTGG TACGCGGTAT CGTCGCCATC TTCTGGTACG GCGTGCAGAC CTACTTCGCC
TCCACCGCGG TGGCGCTGCT GCTCAACTCG CTGCTGCAAC CGCAGGACCC GGCCGTATAC
ATGGGCCTGA CCGCCATCGG CTGGCTGTCC TACGTGATCG TCTGCCTGTT CCAGGTGGCG
TTGTTCGTCT GCGGCATGAG CTGGATCACC CGCTTCCTCA ACTGGGCCGG GCCGCTGGTC
TATGTGGTGA TGATCGCGCT GATGGGCCTG ATCTGGTACA AGGCCGGCCC CAGCCTGCTC
AGCGAGCTGG GCAACATCTT CAGTGGCACC GGTGAATACA AGGCCGGCCC GGTGGCTGCC
TTCTTCGCGG TGGTCGGCAC CATGGTCGCC TACTTCGCCG CGGTGGTGAT CAACTACGGC
GACTTCGCAC GCTTCGTCAA AAGCGAGAAG CAGATGACCA TCGGCAACTT CCTCGGCCTG
CCGGTGAGCC TGGCGTTCTT CTCGCTGATC GCCCTGGTGA TCACCGCGGG TACCGTGGTG
GTGTTCGGCG AGACGCTGAC CAACCCCACC GACATCGTCG CGCGCGTCGA TAACCTGACC
CTGACCATCA TCGCCGCGCT GACCTTCTTC GCCGCGACCG TGGGCATCAA CCTGGTGGCC
AACTTCATCC CGCCGGCCTA CGACCTGGCC AACCTAGCCC CGGCACATAT CAGCGCGCGC
ACTGGCGGCT TCATCACCGC CGGCATCGCC TTCTTCATCG GCGCGCTGTG GGTCGCCTTC
ATCAGCAACG TCGGCATCGC CGCCTTCGTC GATACCCTCG GCGCCGTGCT GGCGCCGCTG
TACGGCATCA TCGTCGTCGA CTATTACCTG GTGCGCCGGC GCAAGCTCGA CCTGCAGCAG
CTGTTCAGCG CTGAAGTCGG CTCGGCCTAC TACTTCGACG GCGGCTGGAA CCGCAAGGCG
CTGATCGCCT TTGCCATCGC CTCGGTGTTC TCCGTCGCCT CGGTCTGGGC GCCCGTTCTG
ACCCAGCTGT CGGGCTATTC CTGGCTGCTT GGCGCCCTGC TCGGCGCGCT ACTGCACTAT
GGCCTGATGC GCGGCCAGGC GCAGGCGCTA AAGCGCGCCG ACGCCACCGT CTAA
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| Protein sequence | MTRIQNRNET CRQTSSYAVA AQEQNWELSM SNAEDFRIKH IDTSLHNEDL APLAPEKRTW
GWFEIFNVWS NDIQSLFGYT LAATLFISYG LNGWAVLAGI VLAGFIVMGL VQLTGKPSVK
YGIPFPVFAR ASMGVRGANF PALVRGIVAI FWYGVQTYFA STAVALLLNS LLQPQDPAVY
MGLTAIGWLS YVIVCLFQVA LFVCGMSWIT RFLNWAGPLV YVVMIALMGL IWYKAGPSLL
SELGNIFSGT GEYKAGPVAA FFAVVGTMVA YFAAVVINYG DFARFVKSEK QMTIGNFLGL
PVSLAFFSLI ALVITAGTVV VFGETLTNPT DIVARVDNLT LTIIAALTFF AATVGINLVA
NFIPPAYDLA NLAPAHISAR TGGFITAGIA FFIGALWVAF ISNVGIAAFV DTLGAVLAPL
YGIIVVDYYL VRRRKLDLQQ LFSAEVGSAY YFDGGWNRKA LIAFAIASVF SVASVWAPVL
TQLSGYSWLL GALLGALLHY GLMRGQAQAL KRADATV
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