Gene Pmen_2761 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_2761 
Symbol 
ID5107557 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp3035857 
End bp3037149 
Gene Length1293 bp 
Protein Length430 aa 
Translation table11 
GC content64% 
IMG OID640504011 
Producthypothetical protein 
Protein accessionYP_001188248 
Protein GI146307783 
COG category[S] Function unknown 
COG ID[COG3748] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.654808 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value0.643822 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGAAGCAC ATTTCACCGA ATGGCTAAAC CTGGGCATCC GCTGGATCCA TATGATCACC 
GGTATCGCCT GGATCGGCGC ATCCTTCTAT TTCGTCTGGC TGGAGAACAA CCTCAACCGG
AGCAACCCAC GCGAGGGCCT GTCGGGCGAC CTCTGGGCGA TTCACGGCGG CGGTATCTAC
CACCTGGAAA AGTACAAGCT GGCTCCGCCG AAAATGCCGG AGAACCTGCA CTGGTTCAAA
TGGGAGGCCT ATGCCACCTG GCTGTCGGGC GTCGCCCTGC TGCTGGTGGT GTACTACCTC
AACCCCAGCC TGTACCTGGT CAAGCCGGGC GTCGAGCTGT CCCCGGCGAT GGGCATCGCC
ATCGGCCTCG GCTCCATGGC GATCAGCTAT GTGATCTACC ACTTCCTCTG CGACTCGCCC
CTGGGCAAGC GCCCCGCCCT GCTCGGCGCC GTGCTGTTCG TGCTGATCAT CGCCGCCGCC
TATGGCTTCA GCCAGATCTT CAGCGGCCGC GCGGCGTACA TCCATGTCGG TGCGATCATC
GGCACCATCA TGGTCGGCAA CGTGTTCTTC ACCATCATGC CGGCCCAGCG TGCGCTGGTT
AAGGCTATCG AAGAGAACCG CGAACCCGAC CCGGTACTGC CGGCCAAGGG CCTGCTGCGC
TCACGGCACA ACAACTACTT CACCCTGCCG GTGCTGTTCA TCATGATCAG CAACCACTTC
CCGAGCACCT ACGGCAGCCA GTACAACTGG CTGATCCTGG CCGGTATCGC GATTCTCGCC
GTGCTGGTGC GCCACTACTT CAACACCCGT CACGACAGCA GCAAGTACGT CTGGACCCTG
CCGGCCGCAG CACTGGGCAT GATCTGCCTG GCCTACGTCA CCGCGCCGAT CCACCGCTCG
CCGACCGCCG CGCCGGTGGC CGCCGTTGAA CAGCCGGCCA GCGCTACCCT GGCCAAGGTC
GAGGAAGTCG GTGAGGCTCC GGCGACCGCC GAGCAGGCAG CGCCGAGCGA AGCACCGGCA
GCCGGCTCGG GCGTCGACTT CGCCAAGGTC GAGAGCGTGA TCCACGAGCG CTGCACCGTT
TGCCACTCGG CCAGCCCCAC CAGCCCGATG TTCAGCACCG CACCGGCCGG CTTCATGCTC
GACACCCCCG AGCAGATGAA GGCGCAGGCG GCGAAGATCC ATGCGCAGAC CGTGGCCACG
CAGATCATGC CGCTGGGCAA CATCACCCAG ATGACCCAGG ACGAACGCGA CCTGATCGGC
AGCTGGATCG CCAAGGGCGC CCAGATCAAC TGA
 
Protein sequence
MEAHFTEWLN LGIRWIHMIT GIAWIGASFY FVWLENNLNR SNPREGLSGD LWAIHGGGIY 
HLEKYKLAPP KMPENLHWFK WEAYATWLSG VALLLVVYYL NPSLYLVKPG VELSPAMGIA
IGLGSMAISY VIYHFLCDSP LGKRPALLGA VLFVLIIAAA YGFSQIFSGR AAYIHVGAII
GTIMVGNVFF TIMPAQRALV KAIEENREPD PVLPAKGLLR SRHNNYFTLP VLFIMISNHF
PSTYGSQYNW LILAGIAILA VLVRHYFNTR HDSSKYVWTL PAAALGMICL AYVTAPIHRS
PTAAPVAAVE QPASATLAKV EEVGEAPATA EQAAPSEAPA AGSGVDFAKV ESVIHERCTV
CHSASPTSPM FSTAPAGFML DTPEQMKAQA AKIHAQTVAT QIMPLGNITQ MTQDERDLIG
SWIAKGAQIN